plot_interactions {CEMiTool} | R Documentation

## Network visualization

### Description

Creates a graph based on interactions provided

### Usage

    plot_interactions(cem, ...)

    ## S4 method for signature 'CEMiTool'
    plot_interactions(cem, n = 10, ...)

### Arguments

`cem` | Object of class `CEMiTool`.
`...` | Optional parameters.
`n` | number of nodes to label

### Value

Object of class `CEMiTool` with profile plots

### Examples

    # Get example CEMiTool object
    data(cem)
    # Get example gene interactions data
    int <- system.file("extdata", "interactions.tsv", package = "CEMiTool")
    int_df <- read.delim(int)
    # Include interaction data into CEMiTool object
    interactions_data(cem) <- int_df
    # Plot resulting networks
    cem <- plot_interactions(cem)
    # Check resulting plot
    show_plot(cem, "interaction")

[Package CEMiTool version 1.16.0 Index]