add_sym {BiocOncoTK} | R Documentation

## add symbols in rowData to a SummarizedExperiment that has Entrez IDs for rownames

### Description

add symbols in rowData to a SummarizedExperiment that has Entrez IDs for rownames

### Usage

    add_sym(x)

### Arguments

`x` | SummarizedExperiment instance

### Note

Will fail if 'symbol' is a column of rowData(x)

### Examples

    if (interactive()) {
      bq = pancan_BQ()
      rnse = try(buildPancanSE(bq, assay="RNASeqv2"))
      if (inherits(rnse, "try-error")) stop("probably need CGC_BILLING set in environment or with pancan_BQ")
      add_sym(rnse)
    }

[Package BiocOncoTK version 1.12.1 Index]