map_tcga_ncit {BiocOncoTK} | R Documentation

## a manually constructed table mapping TCGA acronyms to NCIT thesaurus tags

### Description

a manually constructed table mapping TCGA acronyms to NCIT thesaurus tags

### Usage

    map_tcga_ncit

### Format

data.frame

### Note

Constructed using ontoProc::getOncotreeOnto() result. See the vignette on Mapping TCGA tumor codes to NCIT for elaborating the mapping to aggregate tumors into NCIT organ systems.

[Package BiocOncoTK version 1.12.1 Index]