scanFDR {BioNet} | R Documentation

## Dataframe of scores over a given range of FDRs

### Description

The function generates a dataframe for a given range of FDRs.

### Usage

    scanFDR(fb, fdr, labels=names(fb$pvalues))

### Arguments

`fb` | Fitted bum model.
`fdr` | Vector of FDRs.
`labels` | Data frame labels.

### Value

Dataframe of scores for given p-values and a range of FDRs.

### Author(s)

Marcus Dittrich

### See Also

`bumOptim`, `fitBumModel`

### Examples

    data(pvaluesExample)
    pvals <- pvaluesExample[,1]
    bum <- bumOptim(pvals, starts=10)
    scores <- scanFDR(fb=bum, fdr=c(0.1, 0.001, 0.0001))
    scores[1:10,]

[Package BioNet version 1.52.0 Index]