grn_average_rank {BioNERO} | R Documentation

## Rank edge weights for GRNs and calculate average across different methods

### Description

Rank edge weights for GRNs and calculate average across different methods

### Usage

    grn_average_rank(list_edges)

### Arguments

`list_edges` | List containing edge lists as returned by the function `grn_combined`.

### Value

Edge list containing regulator, target and mean rank from all algorithms.

### Examples

    data(filt.se)
    tfs <- sample(rownames(filt.se), size=50, replace=FALSE)
    grn_list <- grn_combined(filt.se, regulators=tfs, nTrees=2)
    ranked_grn <- grn_average_rank(grn_list)

[Package BioNERO version 1.0.4 Index]