check_SFT {BioNERO} | R Documentation

## Check scale-free topology fit for a given network

### Description

Check scale-free topology fit for a given network

### Usage

    check_SFT(edgelist, net_type = "gcn")

### Arguments

`edgelist` | Edge list as a data frame containing node 1, node 2 and edge weight.
`net_type` | Type of biological network. One of "gcn", "grn", or "ppi". Default: gcn.

### Value

A list with SFT fit statistics and a message indicating if the network is scale-free.

### Examples

    set.seed(1)
    exp <- t(matrix(rnorm(10000), ncol=1000, nrow=200))
    rownames(exp) <- paste0("Gene", 1:nrow(exp))
    colnames(exp) <- paste0("Sample", 1:ncol(exp))
    cormat <- cor(t(exp))
    edges <- cormat_to_edgelist(cormat)
    check_SFT(edges)

[Package BioNERO version 1.0.4 Index]