list_bgee_ref_intergenic_species {BgeeCall} | R Documentation

## List species having Bgee reference intergenic sequences

### Description

Return information related to species having Bgee reference intergenic sequences available for the selected Bgee intergenic release:

- speciesId the NCBI species ID of the species

- specieName scientific species name

- numberOfLibraries number of libraries used to generate these reference intergenic sequences

- genomeVersion version of the genome used to generate the reference intergenic sequences

If a BgeeMetadata object is provided this function retrieve the list of species using BgeeMetadata@intergenic_release. If only a 'release' is provided it will use it to retrieve the list of species. If none of them are provided the default Bgee reference intergenic release will be used.

### Usage

    list_bgee_ref_intergenic_species(myBgeeMetadata = NULL, release = NULL)

### Arguments

`myBgeeMetadata` | A Reference Class BgeeMetadata object
`release` | A Bgee reference intergenic release name

### Value

list all species having reference intergenic sequences available in the selected release

### Author(s)

Julien Wollbrett

### Examples

    {
    bgee <- new("BgeeMetadata")
    list_bgee_ref_intergenic_species(myBgeeMetadata = bgee)
    list_bgee_ref_intergenic_species(release = '0.2')
    }

[Package BgeeCall version 1.8.0 Index]