Autotuner-class {Autotuner} | R Documentation

## Autotuner

### Description

This file contains the skeleton to the Autotuner class used through out Autoutuner.

This object is a generic object designed to run the different functions of the Autotuner package. The slots represent content or data that the package uses throughout the different functions.

### Slots

`time`

  A list containing vectors of scan time points from each sample.

`intensity`

  A list containing vectors of scan intensity points from each sample.

`peaks`

  Regions within each sample identified as peaks by slidingwindow analysis.

`peak_table`

  A data.frame containing information on each peak after further processing is done to the data.

`peak_difference`

  A data.frame containing information on how peaks are eluted differently over time.

`metadata`

  A data.frame containing metadata for all samples to be run on Autotuner.

`file_paths`

  A string path that leads to the samples to be run on Autotuner.

`file_col`

  A string for the column name of the column within the metadata that has specific sample names.

`factorCol`

  A string for the column name of the column within the metadata that has specific sample class names.

[Package Autotuner version 1.6.0 Index]