get_ppm {transite} | R Documentation

## Get Position Probability Matrix (PPM) from motif object

### Description

Return the position probability matrix of the specified motif.

### Usage

    get_ppm(motif)

### Arguments

`motif` | object of class `RBPMotif`

### Value

The position probability matrix of the specified motif

### See Also

Other motif functions: `generate_iupac_by_kmers()`, `generate_iupac_by_matrix()`, `generate_kmers_from_iupac()`, `get_motif_by_id()`, `get_motif_by_rbp()`, `get_motifs_meta_info()`, `get_motifs()`, `init_iupac_lookup_table()`, `set_motifs()`

### Examples

    get_ppm(get_motif_by_id("M178_0.6")[[1]])

[Package transite version 1.8.0 Index]