zh.data {tomoda} | R Documentation

## A raw read count matrix of zebrafish injured heart.

### Description

A dataset containing gene expression across 40 sections of zebrafish heart generated with Tomo-seq. The zebrafish heart is 3 days post cryoinjury (3 dpi).

### Usage

    data(zh.data)

### Format

A numeric matrix with 16495 genes as rows and 40 section as columns. Its row names are gene names and column names are section names.

### Source

https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE74652

### References

Wu CC, Kruse F, Vasudevarao MD, et al. Spatially Resolved Genome-wide Transcriptional Profiling Identifies BMP Signaling as Essential Regulator of Zebrafish Cardiomyocyte Regeneration. Dev Cell. 2016;36(1):36-49. doi:10.1016/j.devcel.2015.12.010

[Package tomoda version 1.0.0 Index]