motif.hg19.CTCF.chr22.cov {sevenC} | R Documentation

## CTCF motifs on human chromosome 22 with example coverage.

### Description

This dataset is the same as `motif.hg19.CTCF.chr22` but with one additional metadata colum, named "chip", holding ChIP-seq signals for all motifs in a windows of 1000 bp around the motif center as `NumericList`. The data is from a ChIP-seq experiment for STAT1 in human GM12878 cells. The full bigWig file can be downloaded from ENCODE (Dunham et al. 2012) http://hgdownload.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeSydhTfbs/wgEncodeSydhTfbsGm12878Stat1StdSig.bigWig. See `motif.hg19.CTCF` and `motif.hg19.CTCF.chr22` for a more details and the motif data set.

### Usage

    motif.hg19.CTCF.chr22.cov

### Format

An object of class `GRanges` of length 917.

### See Also

`motif.hg19.CTCF`, `motif.hg19.CTCF.chr22`

[Package sevenC version 1.10.0 Index]