de98956c385d61920c42d3c0b5fc2ed5 *CITATION
6e55f64cc0ef31aa5b68f33b77a15263 *DESCRIPTION
842b95ef5c55a3f18562a16672fcdb10 *INDEX
9304eac484bb7dbeff046c6bae6f0405 *LICENSE
bbede78c5a4f86848de6de851b3df522 *Meta/Rd.rds
4d1492de7968466564e971368d24d147 *Meta/features.rds
ef1ec75b33525af01951ba3b8cdd1d5c *Meta/hsearch.rds
5784837df65229f1268011bf4e0710ed *Meta/links.rds
623e84319135154a7e78cc3beea2152f *Meta/nsInfo.rds
cf10b4cc9a9819b5e739d9f931ae7469 *Meta/package.rds
0bf631af989b748562ceefc7cc1da8b4 *Meta/vignette.rds
a01673af0000fb11d183b5ceb8f7d0a2 *NAMESPACE
25ccfb978a8641d13ebb0f8fcaf169a4 *NEWS
d6c68f1fe41ced6e98a766a3757313da *R/sesame
ddb5dd67bfa5e0409f4c482e0affd1d3 *R/sesame.rdb
f5187edadee062413313189f5940e962 *R/sesame.rdx
c517c9a9d5fdcaea9da8f61aaabb568b *doc/QC.R
ad7ad74ea36244092fa82c8a60b34656 *doc/QC.Rmd
8f0adf335abff21e0aa65a127cdb5a41 *doc/QC.html
d7b186573431c6a21611e86dab3e52ce *doc/datasanitization.R
97d12e3905612535dc3a23c726aee1da *doc/datasanitization.Rmd
3be3bc89390fb6e86fd22e1354d791a7 *doc/datasanitization.html
26aafef56c68fe4aa655732daa83b215 *doc/index.html
fce19d09b5b71bfa97f0c0890e1d5cb8 *doc/largeData.R
29ac14e471e2dfcee70b494f2b726143 *doc/largeData.Rmd
ec84680b6eae423315df06f711a7448d *doc/largeData.html
9fec87c49379991aac39217c662a76a5 *doc/mammal.R
ec9625aba690de8dc2ee478ceef0265f *doc/mammal.Rmd
3e72afdc2148cb7b28831b2811b1dd0e *doc/mammal.html
8f609f1d4a6ce8d39ccd6401d6f4a0a4 *doc/minfi.R
cfb0d59a99ee09cc45ea9a1db38519de *doc/minfi.Rmd
0a53a7e26b845abf82a79019b91624f8 *doc/minfi.html
c390a657cc6b61a2b27bc34c6db80587 *doc/mouse.R
f804a68076bb0d268cb88ab0e9397e97 *doc/mouse.Rmd
799e6058ba0ce0de89a02ea8a89f5eb8 *doc/mouse.html
889426c4fe8239520b39dcf60a468a4a *doc/sesame.R
41e1e0cafc8d338199915a23ca16b5fa *doc/sesame.Rmd
cde33a3c5283436dee9de70ae72785bb *doc/sesame.html
651fa0c479dea7e7b22ffdc1d9219e94 *extdata/GSE36369_NonEBV_SignalA_SignalB_3samples_1k.txt.gz
d5c903467a436217deeebf147764b957 *help/AnIndex
3e826687314ec9f70e3215c659f59665 *help/aliases.rds
8fd5271a2c86957584a1e0a2dd673722 *help/paths.rds
56122636bc275ff48bc2dfc840ee5c88 *help/sesame.rdb
093ea7b29e1bac1594826d7effd903df *help/sesame.rdx
52dc1e100e8667c6b36fe520f1eacf27 *html/00Index.html
0c4a4936d205966198cd70e78691876c *html/BetaValueToMValue.html
d401af098625f6d73e27fd2061770697 *html/DML.html
888a0da4701133eda54021c7c4b4941f *html/DMLShrinkage.html
e85ed7731f2ff13ecd36210c83f9dbf5 *html/DMR.html
78a2abf360cf9deb4520860b0fc96b3f *html/IG-methods.html
79a420ea4ed4d59cc48499b65021d549 *html/IG-replace-methods.html
12dc5c6e4373b035e1d0b9a85eef7950 *html/IGpass.html
6e1ca53ff6763b43c0c257487b482765 *html/II-methods.html
5ccc2fa9f7d50b5ef5d4b08d099542bf *html/II-replace-methods.html
49fdd6f1b952c4c8253813cf77675a69 *html/IIpass.html
c44ca2493409cd866b28ec097bcde15d *html/IR-methods.html
65449c85a85aa7174e208cd04f102f3a *html/IR-replace-methods.html
a8201d81945cf23a52b138a5cc55d2a4 *html/IRpass.html
4b6c61d5cf1cb5edb8a0feba7c5bcd1d *html/MValueToBetaValue.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
fb60476b4cd3a83d226b69984017ce29 *html/RGChannelSetToSigSets.html
70d2ddec716891ecfd114308378940c6 *html/SNPcheck.html
f4d0ea0ba73bfea7a9f6e2dc54f3abf4 *html/SigSet-class.html
6e7501fb2b8cd9e05b3030cdce312ad0 *html/SigSetList-class.html
84e95fffe0062e8b4c11b4d7b48198d5 *html/SigSetList-methods.html
b2b3a2ece5151235f4886fa3c6604f97 *html/SigSetList.html
3bd97f37fa53413da6d607167653ff89 *html/SigSetListFromIDATs.html
9d0e0cfe16cb8326bd79e724cd6878d4 *html/SigSetListFromPath.html
e1c95c42f4ebe2af00e04bf99e8462d3 *html/SigSetToRatioSet.html
e51d20836ac35df4f99fb3a184ac9e21 *html/SigSetsToRGChannelSet.html
025873fc309946006557b3cfd1b10805 *html/as.data.frame.sesameQC.html
7483f7d7139c387488898f004546c2e3 *html/bSubComplete.html
ac26cf711cdab0f3f354647b7a90abe9 *html/bSubMostVariable.html
87ea06cdc9d5a9b32613af3c894d7ebe *html/bSubProbes.html
cc7589a72015c959238ffd79b7c66f15 *html/betaToAF.html
b033c207cf80c8e39c0170d32ca7e016 *html/binSignals.html
cb0b4dd11a1fafd6c8947011f6327c2b *html/bisConversionControl.html
ca273799411a36b4b7591449fce386be *html/buildControlMatrix450k.html
139fe0c52c4942e109815a7716de11fd *html/checkLevels.html
b32331f3c593dbb072a6e2b008026091 *html/chipAddressToSignal.html
6eb73da27f1717c8c7aceecf541f7d2e *html/cnSegmentation.html
76040fe230649758737b0af11f463d26 *html/compareMouseBloodReference.html
a4e6e3f5806885984f519172ef6a6896 *html/compareMouseTissueReference.html
4a1312b07ec9b764c547d0d60e3b7d09 *html/createUCSCtrack.html
ca6d10d266efd18017b525cf45222bd6 *html/ctl-methods.html
7f38f23647786e752cc4027c76356d20 *html/ctl-replace-methods.html
b91b661f014abdf7e5b987bce6767c86 *html/deidentify.html
ac5a9c19af996804780772e835258ae8 *html/detectionMask.html
37f6db7360fb3e0382e46e9ad230330e *html/detectionPfixedNorm.html
fb72aa36f721ea43edd84e6819039fae *html/detectionPnegEcdf.html
db7ef4383c72cf7ecef43ee18362504e *html/detectionPnegNorm.html
3d3d7248d4780f126d50b5e2e184ae47 *html/detectionPnegNormGS.html
7b2503df4d4e808f46d701d097a49ee2 *html/detectionPnegNormTotal.html
fea39c72b9ebafbc9e5bfab58cdc1fed *html/detectionPoobEcdf.html
79ccfe6a2029d062525d1f244b31f307 *html/detectionPoobEcdf2.html
48eaeeee32528617444df4c58fdb8e99 *html/detectionZero.html
4f553f22438a63c99d010502cebeb017 *html/diffRefSet.html
33aad90864398236a8e005e7b5bba28b *html/dyeBiasCorr.html
c1011a06a0726cdad1bd793e62e06657 *html/dyeBiasCorrMostBalanced.html
96a80da1e95b3392e5864da3fb08c1b4 *html/dyeBiasCorrTypeINorm.html
52c2425a4c03fc6c8cc5262e4489782c *html/estimateCellComposition.html
c8ec3d799e1f9c9ae0dad6fb5563e693 *html/estimateLeukocyte.html
69a8eb5d7888e5871a0824edf35fd7dc *html/extra-methods.html
1a973ae9eebda17bf2931a4a1caa3cfd *html/extra-replace-methods.html
1f00093c3a2ea18d305305c31aea5b21 *html/extractDesign.html
7be1d58bab78b408ccdc4daaa9142b53 *html/formatVCF.html
a30784e0188cc387fb4fe6d2482b1e5c *html/getAFTypeIbySumAlleles.html
76406dab5b784628c3f022479990b407 *html/getAutosomeProbes.html
15ecdccf03923d59b3e2fec3f7ae5a6c *html/getBetas.html
0c85fc19464bb05c2298bbf1ad220c67 *html/getBinCoordinates.html
f3fa6fa27c3e1b07f1d3bd2d3281e5ff *html/getNormCtls.html
3bece6a7ddfdc0e756a6d0c766d33d71 *html/getProbesByChromosome.html
b9bd99e1814da3e029c1bf18cb44bb4a *html/getProbesByGene.html
682b5afdf1b64de496a6e166f60ba45e *html/getProbesByRegion.html
b757808c8df7df68edccc375fdc0e902 *html/getProbesByTSS.html
e07d49f7f25d346d6c8cfe63ccc726c1 *html/getRefSet.html
2e204f8aaf4a71d9af08cea45ea6b758 *html/getSexInfo.html
26f2bd1c6fcb79e21a5e40f70478eb7b *html/inferEthnicity.html
a7e04fbc00f0285fd300c50df7ab8cd7 *html/inferSex.html
87cce019317621366476ad4faf6f55d6 *html/inferSexKaryotypes.html
5cc52a174ebf3f9c56bb1ff3f7eb3c34 *html/inferStrain.html
7c78671e03847a0561475d4c52effc92 *html/inferTypeIChannel.html
44df53c062471eedf6392909dca910ac *html/initFileSet.html
61247f8baaad44f1927668bc25e35173 *html/isUniqProbeID.html
35b7184f516cdedc5872c0083c0ce223 *html/makeExampleSeSAMeDataSet.html
e80b50424a41c1b1c6d358e38f9fa220 *html/makeExampleTinyEPICDataSet.html
c3cf83ddf15a978bd619d01887b7e26b *html/mapFileSet.html
eeb4376b41de9573b5981a27ecafcc03 *html/meanIntensity.html
78864bd0f6eb9391ca3fa862e15855c0 *html/noob.html
2da5852c07f8204c225fc4cce235bf92 *html/noobsb.html
f503f4fda118fcb0a91a6cd24f9cf9ca *html/oobG-methods.html
d0f1702a4657f8ced8d739d5b4c5fca4 *html/oobG-replace-methods.html
7f241d7fca6406526df1651144f7fadd *html/oobGpass.html
b18e92405b73d560ae4b6d2e34e55404 *html/oobR-methods.html
53513fd6e4e28c6debda112c24eaadfa *html/oobR-replace-methods.html
53d4986aa16a281883038ee217d0461e *html/oobRpass.html
300c26a44ad30e797c26138c78f5b289 *html/openSesame.html
fd6582d973a87f8bbe9a8843984ffa2e *html/openSesameToFile.html
d2b64dca5054bc0fcc884dca69a650f6 *html/parseGEOSignalABFile.html
1d6faa274114a2c8de4aae2dfb1e0731 *html/predictAgeHorvath353.html
496974857102022a9332be0f5ed38319 *html/predictAgePheno.html
f3cb278623ef9f105c57977a49f0aade *html/predictAgeSkinBlood.html
fa736c3d952338ed22450e435545ba60 *html/predictMouseAgeInMonth.html
64301c7eaa85a8496996cf40da9ca6de *html/print.fileSet.html
e42cc12f5d61c7d78194c642dca6a217 *html/print.sesameQC.html
ee1be5ad5a94157df54945841628d168 *html/probeID_designType.html
a69001d1d142204dcb435faa7db55743 *html/probeNames-methods.html
dba729152cfbf9984c174fd1b7c78fa9 *html/pval-methods.html
a0c9c16f10a23dbc1cbe487736a765bb *html/pval-replace-methods.html
73b13cf62ee7dd08f2e4ac0b8b534e97 *html/qualityMask.html
3f4b3c960b4b9d7312c49257c24af65c *html/qualityRank.html
09dd59c503339d30180be37fb3dd3232 *html/reIdentify.html
f1e97aa0283ac58d8e8ecb8c6290cd4d *html/readFileSet.html
c923bba83265a3a926b5f2f9d3094394 *html/readIDATpair.html
e1aa8a08cc340d70c2bfc87d7e360a10 *html/reopenSesame.html
521860c39a4adb5298bc74d5ba2f46b8 *html/resetMask.html
2917b3559afacf24275eb0dae281455e *html/restoreMask.html
5244bfc9288e8de3bab23100f84fe026 *html/saveMask.html
076efe8957201f01e48344495f75c1ba *html/scrub.html
e3a4d042bc48c5faacc7452bda17d8fa *html/scrubSoft.html
dc76abe8bd6e13a4ea3b69d41ceb8fda *html/searchIDATprefixes.html
16d8196ea3dbaba98967d41ec1c78758 *html/segmentBins.html
feb10151c9ef305ccabc9742ad3a4812 *html/sesame-package.html
b65c5809f5b196ff107f912b273f4daf *html/sesameQC.html
c981915043442f937cb9c8be1298a5f8 *html/sesamize.html
17fad7052006f4d025db73a7cd0e9e47 *html/show-methods.html
61dae979db540548cf6350a3e5b222bb *html/signalMU.html
d24875d8f3defd4efd18bcf6180431bc *html/sliceFileSet.html
3316f37692f121102f7209b828980663 *html/subsetSignal.html
e9c43e3397615a73844bc5346b534e1c *html/summaryExtractCfList.html
6ebbc55f109fe15c8777f7c465fcce16 *html/summaryExtractSlope.html
68a0568f57261d17b8468d672f14e7a0 *html/topSegments.html
3b63c700a73e78d9d6d3ed7ff883c436 *html/totalIntensities.html
ad00912d588055c903222500524d7270 *html/totalIntensityZscore.html
494253242a56067bc80f4b24a47ab0a1 *html/twoCompsEst2.html
c540231a93314523818240991c22d270 *html/visualizeGene.html
836f4d01b375d1d635dde2e60adf0852 *html/visualizeProbes.html
62509d7215cec65d278b664484e330ba *html/visualizeRegion.html
1670dc42b1bc7f7d6fd82ee60371c3e7 *html/visualizeSegments.html
