CTCF_in_10a_overlaps_gr {seqsetvis} | R Documentation

## 100 randomly selected regions from overlapping CTCF peaks in 10a cell ChIP-seq

### Description

MACS2 narrowPeak calls on pooled biological replicates at pval 1e-5 and then 0.05 IDR filtered. IDR cutoffs determined by comparing top 150,000 pvalue sorted peak in replicates.

### Format

GenomicRanges with 3 metadata columns of membership table

### Details

See GEO series GSE98551 for details.

part of `CTCF_in_10a_data`

[Package seqsetvis version 1.10.0 Index]