0a588dae2eec0d2bc2c85e49986f670a *DESCRIPTION
900680b0d4cbc3e877c83f0c40825892 *INDEX
5c9361e287d4f07e754d7ebaf51943ca *Meta/Rd.rds
204ce9995a90cb4bb87eda3c3020af8c *Meta/data.rds
1d15b8cd6573641f81c4126b0438e9c2 *Meta/features.rds
eaf9a025968e71d1035e938c2655071f *Meta/hsearch.rds
df0e14c48d245eaa316b891513c1b7fd *Meta/links.rds
3420b3577ac697d7b38926435f264fe4 *Meta/nsInfo.rds
2ca612176ec98f6ec807a80dcb02c3de *Meta/package.rds
75e4afffae1bb096c4b689ef3401a6b9 *Meta/vignette.rds
745a248d66abbd2455d3fbd851723b27 *NAMESPACE
d6c68f1fe41ced6e98a766a3757313da *R/segmentSeq
615619efeecdef6cc91046c55f64b0a9 *R/segmentSeq.rdb
5080d31bb05afeab1487ad75f20228e2 *R/segmentSeq.rdx
e0fdeb3e6f073566bf1115a64d7ebeda *data/hSL.RData
aa64b9983d25a48733870ed50d1b6b77 *doc/index.html
15f4c7df8fd84000cb3a9bf405b4e688 *doc/methylationAnalysis.R
5f7a9bccf604aff19003d3e514230544 *doc/methylationAnalysis.Rnw
e26400e592c554b5e7a2054f6ce74bbe *doc/methylationAnalysis.pdf
2177f37f8db17c1eaa5773248b58431d *doc/segmentSeq.R
dc3e5ea6060691ece51c17a273a3b0b5 *doc/segmentSeq.Rnw
87a0bbb19ca04e8dbe8f7c86480166bd *doc/segmentSeq.pdf
3e06d773f7fc796b9f8abfbd87859c91 *extdata/SL10.txt
d4614b7e3a4b1d43982ddfb5756b3c55 *extdata/SL26.txt
b743c46dcbdbebc79f25c8402c664099 *extdata/SL32.txt
557c9c052a14cbeb5794a5d40520ee98 *extdata/SL9.txt
f9e97daa13b3f4e7b2554cfc838e20b6 *extdata/short_13_C24_col_trim.fastq_CG_methCalls.gz
6202ab9dfdfca80c02a65f4e6bb528fa *extdata/short_18B_C24_C24_trim.fastq_CG_methCalls.gz
67b74bf8edfa841d34a31dfd467c8c3f *extdata/short_Sample_17A_trimmed.fastq_CG_methCalls.gz
87ff08b3a90565b2d8b826373e30dc0e *extdata/short_Sample_28_trimmed.fastq_CG_methCalls.gz
980b344cf620586acacd236f46a7a13c *help/AnIndex
55240daeac6de923d684977c411e782f *help/aliases.rds
269f19d93fd998180097ef33493f1a2d *help/paths.rds
0afc219af29925ae01fa935775dea2a3 *help/segmentSeq.rdb
b5d9b792eae7603642057dd10bb6770b *help/segmentSeq.rdx
f014efc767dc7a799cb20e0861ad8ae4 *html/00Index.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
23e59c36b4531c4814a0c2fb35a997af *html/SL.html
8e3f00c2a1e2abeea393b7bc22437dcf *html/alignmentClass-class.html
31a2a4cb6b11548d24010548fa4cf355 *html/alignmentData-class.html
9c6d2cb52bccb5ec958a1f0f4ff9a29e *html/alignmentMeth-class.html
d848d10fe169268208e50a23bf8fce0e *html/averageMethylationRegions.html
3659093082f68cdc574dd087d4033ec7 *html/classifySeg.html
1dc02289dfda8682bcf064061afef4e9 *html/findChunks.html
14cf0c3a7cd869e539dbfdb3e1c5ae4f *html/getCounts.html
4c71f4880b5f401c5648ac87b9dee64e *html/getOverlaps.html
3770ef0f7290b4f7412d57a389b7aa1c *html/givenExpression.html
4a0da490d29cacbf9f55339b31624363 *html/hSL.html
79cfe708c0bdba4f02b63b9548bb8c05 *html/heuristicSeg.html
81968d5b082390199615f51e34357efc *html/lociData-class.html
8e7198d4a16e5795e4c5042fe05d49b0 *html/lociLikelihoods.html
f2ea1dbed6424342cb98601a43a916a3 *html/mergeMethSegs.html
d0dfb8df081d629672a086ba7c52f00c *html/methData-class.html
3eb9652ea99fa80b6ba1b1a256f89cd3 *html/normaliseNC.html
b64f99a89d6d93d914102d6fdb0b854f *html/plotGenome.html
9b910f48bb2ff9d465ef8e954eff55f0 *html/plotMeth.html
8d699bd435d3d271f15b9d473339a375 *html/plotMethDistribution.html
775e726c8be758197d902ee6aa224ba1 *html/processAD.html
a6ee9cbd9bf54e482e50fe1641fa94c7 *html/readMethods.html
50f4e675a2d2c69072091a24dbbe89b6 *html/readMeths.html
58d6239b8d8369413611fd09737f1423 *html/segClass-class.html
1745564cbe7ebb78dd058ffd0e74d7f5 *html/segData-class.html
020faf2a1dfb0f5548798a5e5f9d58a6 *html/segMeth-class.html
891bcf9b287aba99a89a317a291341ec *html/segmentSeq-package.html
6d1558cda8e3b2c812fafc8dfbb1c73c *html/selectLoci.html
bae3263005910a85a3543d34e9f5c57d *html/summariseLoci.html
a93aedfb281fedb623fb36a029a46347 *html/thresholdFinder.html
