Package: sapFinder
Type: Package
Title: A package for variant peptides detection and visualization in
        shotgun proteomics.
Version: 1.28.0
Date: 2020-09-05
Author: Shaohang Xu, Bo Wen
Maintainer: Shaohang Xu <xsh.skye@gmail.com>, Bo Wen <wenbo@genomics.cn>
Depends: R (>= 3.0.0),rTANDEM (>= 1.3.5)
Suggests: RUnit, BiocGenerics, BiocStyle
Imports: pheatmap,Rcpp (>= 0.10.6),graphics,grDevices,stats, utils
biocViews: ImmunoOncology, MassSpectrometry, Proteomics, SNP, RNASeq,
        Visualization, ReportWriting
Description: sapFinder is developed to automate
    (1) variation-associated database construction,
    (2) database searching,
    (3) post-processing,
    (4) HTML-based report generation in shotgun proteomics.
License: GPL-2
LazyLoad: yes
LinkingTo: Rcpp
PackageStatus: Deprecated
git_url: https://git.bioconductor.org/packages/sapFinder
git_branch: RELEASE_3_12
git_last_commit: e960481
git_last_commit_date: 2020-10-27
Date/Publication: 2020-10-27
NeedsCompilation: yes
Packaged: 2020-10-28 04:06:32 UTC; biocbuild
Built: R 4.0.3; x86_64-w64-mingw32; 2020-10-28 15:13:20 UTC; windows
Archs: x64
