abif-class {sangerseqR} | R Documentation

## ABIF Class Objects

### Description

S4 object returned by `read.abif` containing all fields in the ABIF file format (see http://home.appliedbiosystems.com/support/software_community/ABIF_File_Format.pdf). Data fields vary by machine and basecaller versions. Must be converted to `sangerseq` to be used in other functions from this package.

### Slots

`header`

  Header information from the file.

`directory`

  Directory information from file containing field names and information for reading binary data.

`data`

  List object containing all data fields and values in file. Included fields vary by machine and basecaller versions.

### See Also

`read.abif`, `scf`, `sangerseq`

### Examples

    hetab1 <- read.abif(system.file("extdata",
                                    "heterozygous.ab1",
                                    package = "sangerseqR"))
    str(hetab1)

[Package sangerseqR version 1.26.0 Index]