plotVolcano {rexposome} | R Documentation

## Function to draw a plot of the pvalues stored in an `ExWAS` object

### Description

This function draws a sort of manhattan plots using the p-value of the association of the exposures with phenotypes of an `ExWAS` object.

### Usage

    plotVolcano(x, p.value = -log10(0.001), labels, show.effect = FALSE)

### Arguments

`x` | An `ExWAS` object which effect will be ploted.
`p.value` | (default `"-log10(0.001)"`) Threshold for P-Value.
`labels` | (optional) Character vector with the labels for each exposure. It must be labeled vector.
`show.effect` | (default `FALSE`) Applyes an exponential transformation on the effects of the exposures.

### Value

An object of class `ggplot`.

### See Also

`exwas` as a constructor for `ExWAS` objects, `extract` to obtain a table with the result of the ExWAS, `plotEffect` to see or compare effects of one or two models.

[Package rexposome version 1.12.4 Index]