per_read_quality {qckitfastq} | R Documentation

## Compute the mean quality score per read. `per_read_quality`

### Description

Compute the mean quality score per read. `per_read_quality`

### Usage

    per_read_quality(infile, output_file = NA)

### Arguments

`infile` | Path to FASTQ file
`output_file` | File to write plot to. Will not write to file if NA. Default NA.

### Value

Data frame of mean quality score per read

### Examples

    infile <- system.file("extdata", "10^5_reads_test.fq.gz", package = "qckitfastq")
    prq <- per_read_quality(infile)

[Package qckitfastq version 1.6.0 Index]