cf37896d36f429af15853f15a32e7834 *DESCRIPTION
b57f1f87aaa983fa238ab1a4c1216bf7 *INDEX
8bc43aacce745565bfd4992eb6d38f5f *Meta/Rd.rds
715004a88c9fc60a5f4565ed25ee997e *Meta/data.rds
1d15b8cd6573641f81c4126b0438e9c2 *Meta/features.rds
4c0d11eb0066c9a7d96a6ce020f8e3d7 *Meta/hsearch.rds
692878f5e1710013710a896388fe69ff *Meta/links.rds
0328332a03448bf75e07a36ae97429dc *Meta/nsInfo.rds
d3ddf9f228dd96045436b980ea1ae864 *Meta/package.rds
b2aafabe6ced42d94d2a426eff296bcf *NAMESPACE
594c0d4f02b79551b089be17d3c83296 *NEWS
d6c68f1fe41ced6e98a766a3757313da *R/pwOmics
3afbfa0152f4e990999a1fa55b8443e0 *R/pwOmics.rdb
e4e686cfc4f244528806b6c47d1df2b4 *R/pwOmics.rdx
62f1951990e4a48b8e9576a63de2a20d *data/OmicsExampleData.RData
0173a6340a384e4863487ec72a92f25c *extdata/Genelists/Genelist_biocarta.RData
8ce73f94923b113e1b37341189cc1fa5 *extdata/Genelists/Genelist_kegg.RData
3966ca5db8518cdf31378969a73c53e7 *extdata/Genelists/Genelist_nci.RData
9f57a879f9965936a1ae43478a963a13 *extdata/Genelists/Genelist_reactome.RData
8212a0c9e1ddcbd8edbc9037b606eca5 *extdata/TF_targets.txt
98b206046ac2e5a7723f5b450b628003 *extdata/chea-background.csv
e179e6d1de61e0f377aef5c587e79401 *extdata/mat_phospho.csv
cbff0dfb526df4226b5903b7443c06f6 *extdata/phospho_anno.txt
1bfd415c150f248004e280346bdcd2fc *extdata/phospho_reg_table.txt
52bfb1275c60a7e2e3b2bbbb1bb348fd *extdata/transcriptome_signif.txt
c0a168a7153f25de41757b7fd6b64472 *help/AnIndex
1e2209f2002e5a9061c216bba17a188b *help/aliases.rds
dadf361945ead46c9a387f12c2903806 *help/paths.rds
fd9101cd14e6c9d395e7696f8504c85d *help/pwOmics.rdb
e2082e98b47c676568709807e9885550 *help/pwOmics.rdx
b9b1361e9f93e89e9363627191ae20d4 *html/00Index.html
859618e4169914ea9bd6703dd413756a *html/OmicsExampleData.html
8cbcbfcd86950cf8d8730eed5eb7c103 *html/PWidentallprots.html
5932b917c7cf67ca03d336048f5723ac *html/PWidentallprotssub.html
b0cf1df0f9f6f131c0d325e906f718a4 *html/PWidenttps.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
24fae731cb8f978c961e909617316731 *html/SteinerTree_cons.html
291a29eafe9b183c00dd3005475ce5ad *html/TFidentallgenes.html
bf1225b454d9aca84ce98fd689de676d *html/TFidenttps.html
12d4df8cde270eed0bfd0f62e249f263 *html/addFeedbackLoops.html
114989478ea5cd4710b67f8326277820 *html/clusterTimeProfiles.html
58a96bf0684a3d6d4dc02c3234c25dc5 *html/consDynamicNet.html
2676e795bb160ab9f004b3e560dbe370 *html/createBiopaxnew.html
4d451e624eac9de06c353a78e77af745 *html/createIntIDs.html
42ec8ec96095c9778f48cc307bf5d490 *html/findSignalingAxes.html
b273b735d5a0a64d17d60131ada76eb5 *html/findxneighborsoverlap.html
2c0b5bb0ffbd57b3efbc66405b025e56 *html/findxnextneighbors.html
b9920866120475e570412192e4e39b3e *html/genGenelists.html
aef652047f39f64620d1a269def7a07c *html/genGenelistssub.html
c89ec56d28d9036808714727a498e565 *html/genIntIDs.html
36afa2a1bbbe1599f939f7fcd088ce5b *html/generate_DSSignalingBase.html
fa40c24ad38f48d05e571e75e7bc2756 *html/genfullConsensusGraph.html
7062717b3c3f166770de8360c758a9ec *html/getAlias_Ensemble.html
3c6f6ed5b3f6306c6cccdb19dbac241a *html/getAliasfromSTRINGIDs.html
b0c490127d3f6f02160b0838b01866e4 *html/getBiopaxModel.html
567ac4d8bd6017bef2b2b6f9da7011a2 *html/getConsensusSTRINGIDs.html
246ff8344ffe339cefb9c16c31b6d14e *html/getDS_PWs.html
e827ab528ffb1615a92fe9c328a7fda7 *html/getDS_TFs.html
fc5c30645fc3fe231a41d4930dc4a1ee *html/getDS_TGs.html
177a2263dae90bba65cd7db7986efb5e *html/getFCsplines.html
4179915671bc1f23088f04d1c47fe83b *html/getGenesIntersection.html
aabc57a30fb4055513324bae9c52f9f2 *html/getOmicsDataset.html
39dfdc000be815e746a40afab95f9758 *html/getOmicsTimepoints.html
dbdd0bb167e4afcb19256c0fd1f150ac *html/getOmicsallGeneIDs.html
064d84cc63e9dd843fb666570eeb4c4b *html/getOmicsallProteinIDs.html
68e5218d60a059470c6e45f275ee7202 *html/getProteinIntersection.html
f75d4b4cf956f8725b9581e110a647d4 *html/getSTRING_graph.html
6b4b53b3e1ebc59d5f3506fbfd006eed *html/getTFIntersection.html
1b1aa217e41dbbfd53f576d379d77bb9 *html/getUS_PWs.html
20a104107641023dbde48bd0169125df *html/getUS_TFs.html
5900f579541f40ceefbc5cd5b350c982 *html/getUS_regulators.html
b115f5b069b57280a8182ddcc432a6ab *html/get_matching_transcripts.html
8f2650a5a2f15b9269995b4088ca30b6 *html/getbipartitegraphInfo.html
ded85ac91604678e28e670bb59d8b03e *html/gettpIntersection.html
0c67bd3aea7ac387dba2095c7622a3a2 *html/identPWsofTFs.html
e76f410740fc3762bfb11da3807755d2 *html/identRegulators.html
395bbe7bf2e2585cfb5b2246d8992951 *html/identTFTGsinPWs.html
08f730cd0cdd657092abcd21ea7d8b26 *html/identTFs.html
05eab9803206623ecc53b8a2d824424e *html/identifyPR.html
ab8327caba0c4406cdc57952ce525aa5 *html/identifyPWTFTGs.html
6b88e3098b9828a24d94971713a8f1f2 *html/identifyPWs.html
bcd9ceeb23547dcf48ae920413879850 *html/identifyRsofTFs.html
0e822c5a4c0be33793fb55a03875970d *html/identifyTFs.html
b98517fe6960aee6d24948f4d98e170d *html/infoConsensusGraph.html
127251d9752c521319ee5a5d17a3d9c3 *html/loadGenelists.html
1f0af84b2f37c5f6a9f451a31790bc4e *html/loadPWs.html
488abd9a3d5055e58e4e1487a70cc890 *html/plotConsDynNet.html
194742daf1cc5e4307e107d4873838b3 *html/plotConsensusGraph.html
d83433b74f5fc0c1f99cf3df84b0b754 *html/plotConsensusProfiles.html
ad9fbafafefb2810e44f2771f86c8ed0 *html/plotTimeProfileClusters.html
0a038d046ba00044dcd46f1f166fd9c6 *html/predictFCvals.html
bc073f335cb67cab3ec261f166c0508e *html/preparePWinfo.html
ec317b2ad8cfbd485e89b082c1192500 *html/print.OmicsData.html
52f2c1d6613a94733beed6c4f0f37ac5 *html/pwIntOmics-package.html
8515cb9c23ece602e9974cc998f9d081 *html/readOmics.html
7211b275dc4569d21751a8c0170c964c *html/readPWdata.html
5a912b9fd1dc85eb5041c01a0adc202b *html/readPhosphodata.html
1bcc366be9ee96d39365f35ea7ed5d7b *html/readTFdata.html
23b33e410649314c35c8e9f46249178e *html/readTFtargets.html
b48c655c63e53eb6b338da779e1f8b1b *html/selectPWsofTFs.html
837262554ba13bde96e21da69e148b16 *html/staticConsensusNet.html
32abac7813a7a4661a9578bde3538685 *html/temp_correlations.html
122cc06fcca219f21a1377b9d567c51e *unitTests/provided_TF_genes.txt
ecdaa851b286ef5c57d39631fabf5bcb *unitTests/pwIntOmics_exported.R
fe0a87544ccf51eb8843918e086046c7 *unitTests/pwIntOmics_internal.R
