DataGeNET.Psy-class {psygenet2r} | R Documentation

## Class DataGeNET.Psy

### Description

Class `DataGeNET.Psy` is the basic object use in `psygenet2r` package. It is the main data container to using the different functions to query PsyGeNET database and generate teir output. The constructors of this class are the functions `psygenetGene` and `psygenetDisease`.

### Slots

`type`

  Character containing `'gene'` of `'disease'`. It is used to eprform the correct query to PsyGeNET.

`search`

  Character containing `'single'` of `'list'`.It is used to eprform the correct query to PsyGeNET.

`database`

  Character containing the name of the database that will be queried. It can take the values `'MODELS'` to use Comparative Toxigenomics Database, data from mouse and rat; `'GAD'` to use Genetic Association Database; `'CTD'` to use Comparative Toxigenomics Database, data from human; `'PsyCUR'` to use Psychiatric disorders Gene association manually curated; `'CURATED'` to use Human, manually curated databases (PsyCUR and CTD); or `'ALL'` to use all these databases.

`term`

  Charcter with the term(s) to search into the database(s).

`qresult`

  `data.frame` with the obtained result

### See Also

psygenetGene, psygenetDisease, DataGeNET.Psy-methods

[Package psygenet2r version 1.22.5 Index]