enrichedPD {psygenet2r} | R Documentation

## Enrichment of a user's input (genes) in PsyGeNET's diseases.

### Description

Test the enrichment of a given gene list on Psychiatric Disorders from PsyGeNET.

### Usage

    enrichedPD(gene, database = "ALL", verbose = FALSE, warnings = FALSE)

### Arguments

`gene` | Name or vector of names (that can be both code or uml) to specific genes from PsyGeNET.
`database` | Name of the database that will be queried. It can take the values `'psycur15'` to use data validated by experts for first release of PsyGeNET; `'psycur16'` to use data validated by experts for second release of PsyGeNET; or `'ALL'` to use both databases. Default `'ALL'`.
`verbose` | By default `FALSE`. Change it to `TRUE` to get a on-time log from the function.
`warnings` | By default `TRUE`. Change it to `FALSE` to not see the warnings.

### Value

A `data.frame` with the enricment at each Psychiatric Disorder

### Examples

    enrichedPD(c("ADCY2", "AKAP13", "ANK3"), "ALL")

[Package psygenet2r version 1.22.5 Index]