5d1480a1ed87589765e31fc39bdc60d2 *CITATION
8d30c9bf257d313777e07b351110e145 *DESCRIPTION
d6d035437b092152c4111cec704b8c10 *INDEX
1e3b65c568f535f54d4ea352f848e64f *Meta/Rd.rds
1d15b8cd6573641f81c4126b0438e9c2 *Meta/features.rds
4b57be8761186907b3f30c5c012a6b53 *Meta/hsearch.rds
f3a726912b9ca46e53671abe985c5b35 *Meta/links.rds
8b6eeb500552caee73948bc76e60db9d *Meta/nsInfo.rds
bcfb3e930811d01a6c503b658c13ad5a *Meta/package.rds
000da3665d328efb72960390eeffec72 *Meta/vignette.rds
296eb705157250cdfc0e975416e60e13 *NAMESPACE
ad2526eb4d4bcabb6fc4b978e146d97a *NEWS
d6c68f1fe41ced6e98a766a3757313da *R/paxtoolsr
80931d30e0f865c4b1a356f32f4be9e6 *R/paxtoolsr.rdb
2ab5aad556d5457ecf5b08cdaad7b806 *R/paxtoolsr.rdx
6d04e35e1764075bf908f2d025c220e4 *doc/index.html
e195539d6d2e01468da38522128eef89 *doc/using_paxtoolsr.R
15ac305c62f0b5ac05d2bdd02bb4ae8f *doc/using_paxtoolsr.Rmd
d9eb43596b7c8b34f6b4255cca7276a9 *doc/using_paxtoolsr.html
57094ba294cbb6fd68b5e557da2bad9b *extdata/10523676-compact.xml
54ab0ba22a9a4c822d8e575990c07331 *extdata/REACT_12034-3.owl
befab228b4b455dad710c9e1580e3fb1 *extdata/biopax3-short-metabolic-pathway.owl
2b5dfeb2ea9bfec99bd6dc4aba646b89 *extdata/dna_replication.owl
0023a3039a2f2658bb8c7885077cbbd5 *extdata/pathways.txt.gz
5a160fa41a75c7c756c2f727535d9d08 *extdata/raf_map_kinase_cascade_reactome.owl
d9802077f40d32d53da69dbbc116d215 *extdata/sif_color_code.txt
7ee52a8e1359ac99e0638777b1e0039e *extdata/tca_cycle.sif
584a03e3df7add5d446aa75e13fd94bf *extdata/test_PathwayCommons12.kegg.hgnc.gmt
8f438be882cf91b769b8ec2bbf4966e3 *extdata/test_PathwayCommons12.netpath.hgnc.gmt
befab228b4b455dad710c9e1580e3fb1 *extdata/test_biopax.owl
360e4ae65db08fb3a419806d3947666b *extdata/test_edgelist.txt
720f4a025c3d8906980885ca1ab33f8b *extdata/test_gsea.gmt
c93c59f7bd8a7d4aafcee2da89ace6f5 *extdata/test_gsea_1.gmt
01d9c9d6de8696250b58d6181392250e *extdata/test_sbgn.xml
7ee52a8e1359ac99e0638777b1e0039e *extdata/test_sif.txt
55bd7efeea626b96b3f332fc3e58d89f *extdata/test_sif_shortestPath.txt
a91fd992f44498a410ba6fb4af7496d0 *extdata/test_sifnx.txt
d4a9f3016f63dd1bddb9cce026810563 *extdata/test_sifnx2.txt
3e2b04768807dcec38b24914ebe7640c *extdata/test_sifnx_250.txt
42d032414c1a6fdeea0fb9e1719d6b6f *extdata/test_sifnx_sm.txt
1751e8c85e38542c5a19cfe17de88522 *help/AnIndex
7be54e84655dd606a10ea636344c41a3 *help/aliases.rds
c04346166ccfbfb903eeea1c8d586988 *help/paths.rds
36330561a66785f4b5450d5ab1f6d508 *help/paxtoolsr.rdb
3f3c6727e7fe67cc793ae8cb2ebeb074 *help/paxtoolsr.rdx
cef746795a5120a4c60703c1be5cbe9d *html/00Index.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
5d80a3388e7b7e9e923a4a524f94c14c *html/addAttributeList.html
6ed42a637d8f9696a47fb3bd951715ea *html/convertDataFrameListsToVectors.html
bde1a02273808d2c5caa2ef2adae99f1 *html/convertSifToGmt.html
f7a82f1c3dfa68ad549c3cf22f627517 *html/downloadFile.html
ae4eb846d2bf297144460b986fda9ced *html/downloadPc2.html
16ae8d78180d5bdeae5a367a72cca747 *html/downloadSignedPC.html
64deae30d07232bcc1e9eca4e6f56ec8 *html/fetch.html
b1679dbc11756864eb5c23fe56e4f525 *html/filterSif.html
aa8318e4491847bac513316c00dfcd34 *html/getCacheFiles.html
57fb7e046a30745cc300cc0d942f7d5a *html/getErrorMessage.html
07c732559727584bab6ae27ef40ea2f2 *html/getNeighbors.html
41555d1aaf5782d1c2a06e026eaeb524 *html/getPc.html
96c9258261c243b42b00402a654f3067 *html/getPcDatabaseNames.html
12c54a9286525ef0edac0141967f9e9a *html/getPcUrl.html
4d26d1a0c354697cd8c9ba0bc3e272fa *html/getShortestPathSif.html
2551740763e51c847598f18a895dc1de *html/getSifInteractionCategories.html
eb484085ca20389b32cd808a3f35fd27 *html/graphPc.html
6f1845ac61f7331fd675cacefa9d5cb4 *html/integrateBiopax.html
a4527184c6e4e4ec413b3806b1b087ad *html/loadSifInIgraph.html
3be71386b74c3d9161fc7de53f4af659 *html/mapAttributes.html
18d2e26c3900329c5ce0edbc8275b1bd *html/mapValues.html
5914577be94907a97078c7a66f4ac6e9 *html/mergeBiopax.html
a826400cbd2d141ccc253dbf101eec56 *html/pcDirections.html
3d29086942a5e0741867f100575bce07 *html/pcFormats.html
6402c0d18c70d7c5dc8b128740331ae6 *html/pcGraphQueries.html
2dd7862f033e554e7c299253ba4eb731 *html/processPcRequest.html
df7dbd95be2128e0f328889957e1a43f *html/readBiopax.html
22a3a2d018e6a060e13c06af85460202 *html/readGmt.html
d5be9446318ef10dd8acf9961725221a *html/readPcPathwaysInfo.html
1f71da35fa8fcd0d6cfefcea4853dabb *html/readSbgn.html
0294cbacfd98249409a80728424bc08c *html/readSif.html
c83a546f5894c75445b36d5f0cf913cf *html/readSifnx.html
22abb0c46f652f34e977aa53bdf7185c *html/searchListOfVectors.html
1eef25b4e720856e2902c3d5a7d76418 *html/searchPc.html
b046e808c1957f8725042dc21ba0df7d *html/splitSifnxByPathway.html
78faa0ae4776fbb6a23f8f9d0121a027 *html/summarize.html
6db9bf196136a6768b3bc83e62b5096d *html/summarizeSif.html
e8e1b3a32f74ddc2d4249ef9beaa6b51 *html/toCytoscape.html
362aadd744b1c9a4d12b92c932d18cb7 *html/toGSEA.html
d93dec726d43ea0de082d12e469ae00d *html/toLevel3.html
313cfbfd8e31a042737bbd6a2110bdd0 *html/toSBGN.html
c2ceb97a93626482152bccfbeaf736b4 *html/toSif.html
f9c042263228e3102248295cb6f79dea *html/toSifnx.html
273d6c5be8c51ccf54498d6d32056369 *html/topPathways.html
f61a9196305a86349a5223e7365d8a05 *html/traverse.html
bfc07dae0056ebda00d0e0370ef181a1 *html/validate.html
469d4a4267d7ecba44de6085eff76076 *ignore/convertIds.R
10b770f4bf107c3605328e762b505f57 *ignore/convertSifnxIds.R
ed2e681553db936079aa21796b1d0a89 *ignore/convertToDF.R
daaee6df65df384e7168e8c0577eceb5 *ignore/convertToDT.R
fb5b7f7caef5743309a18afbc9b3a2ad *ignore/convertToDataFrameWithListOfVectors.R
2aa64b9e72f77fb252234c525477376e *ignore/convertToPathwayList.R
33ea73ea94104e9e72ec060d2470d216 *ignore/del.txt
11a9c3f3e62bbb6f2385c98b78e3b469 *ignore/extractIds.R
0477d290cc88cb8983762f205f7f9ee0 *ignore/readSifnxSmall.R
7b853239982cd3f311b6bbb57e4fd28e *java/paxtools-4.3.1.jar
32810134c877218a48464ea8a46488eb *paxtoolsNotes.txt
