mirtarbase {padma} | R Documentation

## Curated miR-target interaction predictions from miRTarBase

### Description

Data.frame of 10,754 predicted miRNA gene targets from miRTarBase (version 7.0), filtered to include only predictions with the 'Functional MTI' support type.

### Usage

    data(mirtarbase)

### Format

An object of class `data.frame` with two columns: `miRNA`, which provides the miRNA identifier (e.g., `'hsa-miR-20a-5p'`) and `Target Gene`, which provides the corresponding predicted gene target.

### Source

http://mirtarbase.mbc.nctu.edu.tw/php/index.php

### References

Chou et al. (2018) Nucleic Acids Research 46, D296-D302. https://doi.org/10.1093/nar/gkx1067.

### Examples

    data(mirtarbase)
    head(mirtarbase)

[Package padma version 1.0.0 Index]