filterMinMarkers {pRoloc} | R Documentation

## Removes class/annotation information from a matrix of candidate markers that appear in the `fData`.

### Description

Removes annotation information that contain less that a certain number/percentage of proteins

### Usage

    filterMinMarkers(object, n = 10, p, fcol = "GOAnnotations",
      verbose = TRUE)

### Arguments

`object` | An instance of class `MSnSet`.
`n` | Minimum number of proteins allowed per column. Default is 10.
`p` | Minimum percentage of proteins per column.
`fcol` | The name of the matrix of marker information. Default is `GOAnnotations`.
`verbose` | Number of marker candidates retained after filtering.

### Value

An updated `MSnSet`.

### Author(s)

Lisa M Breckels

### See Also

`addGoAnnotations` and example therein.

[Package pRoloc version 1.30.0 Index]