ctmarks {ontoProc} | R Documentation

## app to review molecular properties of cell types via cell ontology

### Description

app to review molecular properties of cell types via cell ontology

### Usage

    ctmarks(cl)

### Arguments

`cl` | an import of a Cell Ontology (or extended Cell Ontology) in ontology_index form

### Value

a data.frame with features for selected cell types

### Note

Prototype of harvesting of cell ontology by searching has_part, has_plasma_membrane_part, intersection_of and allied ontology relationships. Uses shiny. Can perform better if getPROnto() and getGeneOnto() values are in .GlobalEnv as pr and go respectively.

[Package ontoProc version 1.12.0 Index]