plot_tSNE {netDx} | R Documentation

## Plot tSNE

### Description

Plot tSNE

### Usage

    plot_tSNE(psn, pheno)

### Arguments

`psn` | (matrix) Patient similarity network represented as adjacency matrix (symmetric). Row and column names are patient IDs. Note that NA values will be replaced by very small number (effectively zero).
`pheno` | (data.frame) Patient labels. ID column is patient ID and STATUS is patient label of interest. tSNE will colour-code nodes by patient label.

### Details

Plots tSNE of patient similarity network using Rtsne

### Value

(Rtsne) output of Rtsne call. Side effect of tSNE plot

[Package netDx version 1.1.4 Index]