create_sbs192_table {musicatk} | R Documentation

## Uses a genome object to find context and generate standard SBS192 table using transcript strand

### Description

Uses a genome object to find context and generate standard SBS192 table using transcript strand

### Usage

    create_sbs192_table(musica, g, strand_type, overwrite = FALSE)

### Arguments

`musica` | Input samples
`g` | A BSgenome object indicating which genome reference the variants and their coordinates were derived from.
`strand_type` | Transcript_Strand or Replication_Strand
`overwrite` | Overwrite existing count table

### Value

Returns the created SBS192 count table object built using either transcript strand or replication strand

[Package musicatk version 1.0.0 Index]