dcf427f22f04128570f1d58476f311b4 *CITATION
30bfead86e6bb185f9f70bbb85637d31 *DESCRIPTION
5544753131d9ee908f786a1b456e0526 *INDEX
e88d9ade12e2d3951c80299dad934452 *Meta/Rd.rds
1d15b8cd6573641f81c4126b0438e9c2 *Meta/features.rds
38efce3fc254738ab721bbe784088a44 *Meta/hsearch.rds
b096c4de5ba519d2013fd9f623e77a7d *Meta/links.rds
a79b575787ee886bdf9ed35836c52866 *Meta/nsInfo.rds
1f12f265498f272a636257b08e7a0437 *Meta/package.rds
41735e8233d80012adad63add4e1a74b *Meta/vignette.rds
8b13203d21b38f8e40b82a56146221c3 *NAMESPACE
d6424224e3e1862c55673b0861c40aef *NEWS
d6c68f1fe41ced6e98a766a3757313da *R/motifcounter
fe3a6f9c76614303f9f65c0def53f5ca *R/motifcounter.rdb
471d8575f7bb7602bad746715f2c59b2 *R/motifcounter.rdx
8d19a5d7e38a6ebf1d7ef41ae23963a5 *doc/index.html
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4522999932c71a38ebe74b53da6cb32a *doc/motifcounter.Rmd
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50df954ee79d0f5a78eb73d8bc322d4c *extdata/m1.tab
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ab7fc1464e844415056df107769f4b64 *extdata/m2.tab
072c2db184ea9dd62de9a67c747edc44 *extdata/oct4_chipseq.fa
5b38fa6389b08d3a65f21294be7aee07 *extdata/seq.fasta
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9cc226e7e9a2a7797dff257bc31ac5a1 *extdata/seq2.fasta
3b458d2042a7ab6a93442abe29c9edbc *extdata/test.fa
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41a01add41f4e45303e61b6366f07eb9 *extdata/test2.fa
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0cf2f5d8c38b3d48158a42af0589b46c *extdata/x3.tab
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0d596bc3216241c2ef0ac9f67d859305 *extdata/x32.tab
a63c9d9bde5e7d71d5e533284ae38d28 *extdata/x8.tab
3be84dbaba38c8f4b0b0ff4c395e430d *help/AnIndex
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7b6bbd9997ab5ec337274fa1996b1d52 *help/motifcounter.rdx
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7a718829ee93cd1c1ae41f3362e63d3c *html/Background-class.html
202c941fe29c3f5ad992925c50da1e6e *html/Overlap-class.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
3252879b8e98cf29e19ce951887e880d *html/clumpSizeDist.html
138b74a542923abcf84989351963e971 *html/combinatorialDist.html
b7438769295a2535ecbdb3a4cafe1c5f *html/compoundPoissonDist.html
1d690ae7cc8151953f98a4e377a3514c *html/computeClumpStartProb.html
ee3bfc6038c2d9c5528f202cdeff0de8 *html/generateDNAString.html
1139d4e073645851f632b60f818e9a13 *html/generateDNAStringSet.html
3e52be164c311bae0a61b592fd507686 *html/getAlpha.html
428b5519aa814c13411a7b1d902e827a *html/getBeta.html
473bbca5ded6cd3ac3cbbf614f8f19b8 *html/getBeta3p.html
48650c0c2e97ff4eea1a0d2624b90d18 *html/getBeta5p.html
a33e1e365e446ee5d85e030849141f2c *html/getCounts.html
027c9e9040f57db1282334db1091985e *html/getGamma.html
959dd871e6d616a76a6b3d059586f0ca *html/getOrder.html
59928eac56026043bac75e074cd6f3bc *html/getSinglestranded.html
8ac5d7b441c579f630b6f70de2a20488 *html/getStation.html
3ae2db9fd78ec1945e973a71cb9c920b *html/getTrans.html
f46344620d3ae49ae56bb6ceac7b3796 *html/hitStrand.html
0b4c6a06eedfd90db963db5d60b3d9c8 *html/lenSequences.html
49f61cc34a2a949dc90ed74b1bc4e79d *html/markovModel.html
36d84ae389cb569a1259ba54242ee441 *html/motifAndBackgroundValid.html
3311148498a703d582ff8f2068ab260c *html/motifEnrichment.html
6f4f73caf0d62049e88cbc5601d1bf93 *html/motifHitProfile.html
ff62289e3a8770f701e3eb1c6c86dfb4 *html/motifHits.html
2249620949622ddbafe2a0ba648bc0e1 *html/motifValid.html
cc001a452f207e142cea2f5a659885cc *html/motifcounter-package.html
8ea9b2f0fc80e1adc2e5d1cd44585826 *html/motifcounterOptions.html
62d3cedc9ec0789e09b5680d151547f2 *html/normalizeMotif.html
417cbbf1dc4bc3009732a14d3eca1036 *html/numMotifHits.html
a5b416e13e9dda4394af7fd851fe2123 *html/probOverlapHit.html
16a032f2e4a1ad03f2ce40cf8f584ef4 *html/readBackground.html
881d2acd7183e20e4cc7084471c3a5ee *html/revcompMotif.html
885881e0863eee7b07fbd3b0a7b87c1c *html/scoreDist.html
026a328e130a9d73cb7ebfa4c196d92c *html/scoreDistBf.html
1b12772e49fbece46d71cecdc6048d1c *html/scoreDistEmpirical.html
4a320e7abd0d95bc5e4ec914eabb55d5 *html/scoreHistogram.html
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280ac628c7fba4ffe2f65e98967d98d5 *html/scoreProfile.html
279e35e27c5f2d3abcc109d6f5a61de3 *html/scoreSequence.html
ed94565b91298cc604db65c24760ac3f *html/scoreStrand.html
0866619d4609bcf9ab0b9ed4221f3d20 *html/scoreThreshold.html
c72f74325f6f816153a92938923271e1 *html/sigLevel.html
014a0832ea6d5bd054564090b07d18c9 *html/simulateClumpSizeDist.html
01e1ca06846f728b001aceef98bbfb98 *html/simulateNumHitsDist.html
1a8216dd992ca7d8b396852fd04461a4 *libs/i386/motifcounter.dll
0aaf60ada6a1326d0086246ba6ebcac1 *libs/x64/motifcounter.dll
