59e1d2dc2a103216ef167882952bdc0c *CITATION
b34e185f7cc57bc86dc3c78e02f402e7 *DESCRIPTION
53dd8f6f97ee98660837d15ae1f5de6d *INDEX
2fa360d8f7cc84e600fef0829e4ddcf6 *Meta/Rd.rds
1d15b8cd6573641f81c4126b0438e9c2 *Meta/features.rds
8d70e28ff88646c9c390028f30765f67 *Meta/hsearch.rds
2fc3cc7ef30f2d01ad735fb7dc80b23e *Meta/links.rds
68dd2168dca8c79c5e3cdb49892841ed *Meta/nsInfo.rds
d889081829b47e08fbdf9d7b9a0543f2 *Meta/package.rds
d305ea832435369928fd58654ab05f00 *Meta/vignette.rds
0455232cf5757da74591818c4925c39f *NAMESPACE
3aa870af667e5fd2e4cd17e2f6323245 *NEWS
d6c68f1fe41ced6e98a766a3757313da *R/motifStack
fc0352f5e3b6107083ed2dc204ca547b *R/motifStack.rdb
7ac5d12f68b9b4a7ddd57c2c940e9617 *R/motifStack.rdx
c07e8df82e25b2fb9c7880bc82b68322 *doc/index.html
bd8d46159f835f585196e8b17e662adb *doc/motifStack_HTML.R
6e24786a96de53ad281a4265a0fd8c25 *doc/motifStack_HTML.Rmd
775500d764358768d4fc3815e6c4341a *doc/motifStack_HTML.html
55f25e264915a25cd6a06408a2d05726 *extdata/FoxP_SOLEXA.pcm
edca925d6ca03932e85a81e20c6c0a84 *extdata/MA0002.1.jaspar
38206556aec82e605d865385d157c152 *extdata/PSAM.mxr
49ca2809e633ccf48054d760897a8f6b *extdata/PWM.cisbp
f1917006f018e0afa7c65dbccdd4b91a *extdata/RUNX1.pfm
476254bdfdac69a70d52118f31cdf7d7 *extdata/RUNX1.transfac
b2fbf164bbd6dc7a474228911cf20683 *extdata/bin_SOLEXA.pcm
dfd038758f263ea24573af1ede309d1b *extdata/cap.txt
9bed12e20af7736e7a18f02870ce96e3 *extdata/dna.meme
754b2a418af3f4107db51e7fa8e42697 *extdata/fd64A_SOLEXA.pcm
e24bbad06471338e3713e6a660ce0e0b *extdata/fkh_NAR.pcm
cd9a3b475b43fe9b0be6115776ecb92c *extdata/foxo_SOLEXA.pcm
de98e2fd2268ff01893dfd15ad7725c4 *extdata/prot.meme
bcfb9eaa52b6e2eaa4b0b291d2de13eb *extdata/slp1_SOLEXA.pcm
f99d218bca1b7bc1f3e6049952383a27 *extdata/slp2.pfm
f1a24bc055a498f934d84e748a76ebe5 *extdata/slp2_SOLEXA.pcm
7f1aed568d2f20b78b3065bed7f894cd *extdata/test.beeml
7bd6a8148a12c067a63284f179b63880 *extdata/transfac.like.test.transfac
bd4d74cd8213f0bd5e8cc6f960bb1313 *help/AnIndex
09c8400641970c865a3b9d61e5a484e3 *help/aliases.rds
f025a468098f1572a3b62a1a4c006921 *help/motifStack.rdb
86ab1fc88164424b5b71b3552b36b828 *help/motifStack.rdx
a0c0a9aaf75be16efbd02573e306a58c *help/paths.rds
5ab71dd463e2724cffb4c37e50b6d487 *html/00Index.html
c40938879ccbe1f51344755af61c087c *html/AAmotifAlignment.html
f873f5dda384134774289d15d6a5aded *html/DNAmotifAlignment.html
f99b4c094e75ccad726092f820d8ddad *html/DNAmotifToRNAmotif.html
fd57fa7d79ad5d203c504a0d3846d25b *html/GeomMotif.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
c458f7ef3760e002db3b8fe06918b79d *html/browseMotifs-shiny.html
f9ee5fb8443f5fd262ca6c503731feed *html/browseMotifs.html
150e549b8251e4c9e65cd008b857c7bb *html/calF.html
58a68c7a566bea881ea54cb990bd1178 *html/calI.html
af57cd5ff742cf18046922a4ed4354a3 *html/clusterMotifs.html
c330679aa8047c4c2768f01c1d6ecf92 *html/colorset.html
69fe50f9425399c1314eed1a9e280a89 *html/compare2profiles.html
e14e0a8ca3a3fea9f5b5696efd721020 *html/compareProfiles.html
41bffd6a1e67f6821655e9c2ba9c62ce *html/dpGlobal.html
80f22b372fad075b1fdba05617b90ea4 *html/dpLocal.html
6a46c512c8bb64f4c304463f5b66a3b3 *html/geom_motif.html
c6de34c60fa2e2844e43fa199de6552c *html/getALLRscoreFromCounts.html
cea2e4b175fb289d19d1bd9dcded6e9e *html/getDistance.html
ee6b9d1e420484979e02d145165d3b54 *html/getRankedUniqueMotifs.html
4eceaadf78233ca6446a06b7a7e2f911 *html/getScore.html
958ee3a2512e330441274f06816b2771 *html/highlightCol.html
22b4c95402c4c6473f82bb7abab11a76 *html/importMatrix.html
18fa9ee72bd9bcdae38d175379cd46fe *html/marker-class.html
70655747b30e33f37a40713f0c6d77bd *html/matalign.html
f6d3cbc32432cf4b54bbe6e191b26635 *html/mergeMotifs.html
b5d8607aa97174d4a8b206ea77c50558 *html/motifCircos.html
732993908053c13d6cfc0013346d4f63 *html/motifCloud.html
3e046eb65cc48860af402df215157f44 *html/motifGrob.html
a7062ceef3667b180a7c279b3b0eeb30 *html/motifHclust.html
72cf6d6b7e2ee216603107893790d096 *html/motifPiles.html
4d1e47fee0153049af24526a3e2aefd6 *html/motifSig-class.html
75cc6788ae9c28632efd468ed00ea58d *html/motifSignature.html
844f4bee109a05b937cc960860b12ec2 *html/motifStack-package.html
42ab706dc5b2c05fccd5b27bfc8044e2 *html/motifStack.html
ee44f8d5d1a3be85a7a4af82ea51ac2e *html/ouNode-class.html
d136af2690ba3de1bc59c2c297cc6e11 *html/pcm-class.html
5154d6c3d8428aea115073f5406617ee *html/pfm-class.html
b817c198f290d5d28586dce976fbd6bd *html/pfm2pwm.html
69c35dba00dd1ff5c319d94608849b87 *html/plotAffinityLogo.html
6492f4bfc99c070320037a771d381cee *html/plotMotifLogo.html
432c093e1cf890c0877fccc950889bee *html/plotMotifLogoA.html
b9c9e9d09f4320b9400d1080b0727ca0 *html/plotMotifLogoStack.html
aaac0128989a4b532aee5c3a201a9ae1 *html/plotMotifLogoStackWithTree.html
7e8367ecfe16b50d4de7472c37a46577 *html/plotMotifOverMotif.html
854ac912429017376632992d5ee6a317 *html/plotMotifStackWithPhylog.html
a2c59caa71995dbf289315ca69817d0f *html/plotMotifStackWithRadialPhylog.html
d366effdb1c2e7d90859483df4c22db8 *html/plotXaxis.html
7ab7cb5ae9486ecd30819af9684040c9 *html/plotYaxis.html
fd8d14d8c6e7fa0175c119ce335f892d *html/psam-class.html
b7165e4e0f4101ae8cda626d4f872530 *html/pssm-class.html
36ffc901d26d3b78ba53afafa8e4cb4f *html/readPCM.html
8814d7c8e714835d8c5fd5abde4f882c *html/reorderUPGMAtree.html
cdaed1f9b34f38caeb9841dbe24e8843 *html/traceBackGlobal.html
08841d27a699d7ed64a53c126869a2a4 *html/traceBackLocal.html
b1179879e805cf50b70ed384edfe09ca *htmlwidgets/browseMotifs.js
deb7046766809a4f28af2a53446eb133 *htmlwidgets/browseMotifs.yaml
e58d727c134b6a5d2095e4ca116df4f2 *htmlwidgets/lib/d3-tip/d3-tip.css
a30b5ec9ac85140603906e99744340fc *htmlwidgets/lib/d3-tip/d3-tip.js
dac99cdafcae16ea05f91f4f0070d89d *htmlwidgets/lib/d3/d3.v4.min.js
abf5469ee6202eeb5d4da07e34394269 *htmlwidgets/lib/plotWebLogo/d3-plotWebLogo.css
f0ec32edab9b7bcc5d73844345775d83 *htmlwidgets/lib/plotWebLogo/d3-plotWebLogo.js
0b1f037c74afad49b4a2fcf773cef895 *htmlwidgets/lib/saveSvgAsPng/saveSvgAsPng.js
23300ef665d6337ce418274f98dd7850 *unitTests/test_motifStack.R
