reducedDimS {monocle} | R Documentation

## Retrieves the coordinates of each cell in the reduced-dimensionality space generated by calls to reduceDimension.

### Description

Reducing the dimensionality of the expression data is a core step in the Monocle workflow. After you call reduceDimension(), this function will return the new coordinates of your cells in the reduced space.

### Usage

    reducedDimS(cds)

### Arguments

`cds` | A CellDataSet object.

### Value

A matrix, where rows are cell coordinates and columns correspond to dimensions of the reduced space.

### Examples

    ## Not run:
    S <- reducedDimS(HSMM)

    ## End(Not run)

[Package monocle version 2.18.0 Index]