peerj32 {microbiome} | R Documentation

## Probiotics Intervention Data

### Description

The peerj32 data set contains high-through profiling data from 389 human blood serum lipids and 130 intestinal genus-level bacteria from 44 samples (22 subjects from 2 time points; before and after probiotic/placebo intervention). The data set can be used to investigate associations between intestinal bacteria and host lipid metabolism. For details, see http://dx.doi.org/10.7717/peerj.32.

### Usage

    data(peerj32)

### Format

List of the following data matrices as described in detail in Lahti et al. (2013):

- lipids: Quantification of 389 blood serum lipids across 44 samples

- microbes: Quantification of 130 genus-like taxa across 44 samples

- meta: Sample metadata including time point, sex, subjectID, sampleID and treatment group (probiotic LGG / Placebo)

- phyloseq The microbiome data set converted into a `phyloseq-class` object.

### Value

Loads the data set in R.

### Author(s)

Leo Lahti microbiome-admin@googlegroups.com

### References

Lahti et al. (2013) PeerJ 1:e32 http://dx.doi.org/10.7717/peerj.32

[Package microbiome version 1.12.0 Index]