get.ucsc.tbl.tpl {metaseqR} | R Documentation

## Create SQLite UCSC table template defintions

### Description

Returns an SQLIte table template defintion, according to UCSC Genome Browser database table schemas. This functionality is used when the package RMySQL is not available for some reason, e.g. Windows machines. Internal use only.

### Usage

        get.ucsc.tbl.tpl(tab, what="queries")

### Arguments

`tab` | name of UCSC database table.
`what` | `"queries"` for SQLite table definitions or `"fields"` for table column names.

### Value

An SQLite table definition.

### Author(s)

Panagiotis Moulos

### Examples

    db.table.tmpl <- get.ucsc.tbl.tpl("knownCanonical")

[Package metaseqR version 1.30.0 Index]