get_newfastq {icetea} | R Documentation

## Get data to create new ShortReadQ object after barcode trimming

### Description

Get data to create new ShortReadQ object after barcode trimming

### Usage

    get_newfastq(type, fq_R1, fq_R2)

### Arguments

`type` | character. expType of the CapSet object
`fq_R1` | character. fastq Read 1
`fq_R2` | character. fastq Read 2

### Value

A list with new R1 and R2 sequence, quality, barcode string and sample id

[Package icetea version 1.8.0 Index]