filterDups {icetea} | R Documentation

## Filter PCR-duplicates from BAM file using internal UMIs

### Description

Filter PCR-duplicates from BAM file using internal UMIs

### Usage

    filterDups(bamFile, outFile, keepPairs)

### Arguments

`bamFile` | character. Input BAM file
`outFile` | character. Output (filtered) BAM file
`keepPairs` | logical. Keep R2 read?

### Value

Filtered BAM file, after PCR duplicate removal

[Package icetea version 1.8.0 Index]