plotMCS {fmcsR} | R Documentation

## Plot MCS

### Description

Convenience plotting function to visualize and compare MCSs generated by `fmcs` function.

### Usage

    plotMCS(x, mcs = 1, print = FALSE, ...)

### Arguments

`x` | `MCS` object
`mcs` | Selection of MCS solution by position number, default is 1.
`print` | `print=FALSE` turns of printing behavior of class.
`...` | Arguments to be passed to/from other methods.

### Details

The two structures, target and query, used to generate `x` with a call to `fmcs` are plotted next to each other, and the corresponding MCS substructures are highlighted in color.

### Value

Prints summary of MCS to screen and plots their structures to graphics device.

### Note

...

### Author(s)

Yan Wang

### References

...

### See Also

`sdf.visualize`

### Examples

    library(fmcsR)
    data(sdfsample)
    sdfset <- sdfsample
    mcs <- fmcs(sdfset[[1]], sdfset[[2]], au=2, bu=1, matching.mode="aromatic")
    plotMCS(mcs, mcs=1)

[Package fmcsR version 1.32.0 Index]