plotPieTree {flowSpy} | R Documentation

## plot MST pie of FSPY

### Description

plot MST pie of FSPY

### Usage

    plotPieTree(
      object,
      cex.size = 2,
      size.by.cell.number = TRUE,
      as.tree = FALSE,
      root.id = NULL,
      show.node.name = FALSE
    )

### Arguments

`object` | an FSPY object
`cex.size` | numeric. size cex of the dot
`size.by.cell.number` | logical. Whether to size node by cell number
`as.tree` | logical. Whether to show node as tree
`root.id` | numeric. Root id of the tree, if as.tree is TRUE
`show.node.name` | logical. whether to show node name

### Value

ggplot2 figure

### Examples

    if (FALSE) {

    # Runs only have two or more stages
    plotPieTree(fspy, cex.size = 1, size.by.cell.number = T) +
       scale_fill_manual(values = c("#00599F","#FF3222","#009900",
                                    "#FF9933","#FF99FF","#7A06A0"))
    }

[Package flowSpy version 1.4.0 Index]