Subset,flowClust-method {flowClust} | R Documentation

## Subsetting Data Based on Clustering Results

### Description

This method returns a subset of data upon the removal of outliers identified from the clustering (filtering) operations.

### Usage

    ## S4 method for signature 'flowFrame,flowClust'
    Subset(x, subset, ...)

    ## S4 method for signature 'flowFrame,tmixFilterResult'
    Subset(x, subset, ...)

    ## S4 method for signature 'data.frame,flowClust'
    Subset(x, subset, ...)

    ## S4 method for signature 'matrix,flowClust'
    Subset(x, subset, ...)

    ## S4 method for signature 'vector,flowClust'
    Subset(x, subset, ...)

    ## S4 method for signature 'ANY,flowClustList'
    Subset(x, subset, ...)

    ## S4 method for signature 'flowFrame,tmixFilterResultList'
    Subset(x, subset, ...)

### Arguments

`x` | A numeric vector, matrix, data frame of observations, or object of class `flowFrame`. This is the object on which `flowClust` or `filter` was performed.
`subset` | Object returned from `flowClust` or `filter`.
`...` | Further arguments to be passed to or from other methods.

### Value

An object which is a subset of `x`. It also retains the same class as `x`.

### Usage

Subset(x, subset, ...)

### Author(s)

Raphael Gottardo <raph@stat.ubc.ca>, Kenneth Lo <c.lo@stat.ubc.ca>

### References

Lo, K., Brinkman, R. R. and Gottardo, R. (2008) Automated Gating of Flow Cytometry Data via Robust Model-based Clustering. Cytometry A 73, 321-332.

### See Also

`split`, `flowClust`, `filter`

[Package flowClust version 3.28.0 Index]