addStatsFromCSV         Read statistics and nulls from CSV file
computeInfRV            Compute inferential relative variance (InfRV)
deswish                 deswish: DESeq2-apeglm With Inferential Samples
                        Helps
fishpond-package        Downstream methods for Salmon and Alevin
                        expression data
isoformProportions      Create isoform proportions from scaled data
labelKeep               Label rows to keep based on minimal count
makeInfReps             Make pseudo-inferential replicates from mean
                        and variance
makeSimSwishData        Make simulated data for swish for
                        examples/testing
miniSwish               Helper function for distributing Swish on a
                        subset of data
plotInfReps             Plot inferential replicates for a gene or
                        transcript
plotMASwish             MA plot
readEDS                 readEDS - a utility function for quickly
                        reading in Alevin's EDS format
scaleInfReps            Scale inferential replicate counts
splitSwish              Function for splitting SummarizedExperiment
                        into separate RDS files
swish                   swish: SAMseq With Inferential Samples Helps
