barplot.enrichResult    barplot
cnetplot                cnetplot
color_palette           color_palette
dotplot                 dotplot
dotplot,compareClusterResult-method
                        dotplot
emapplot                emapplot
emapplot_cluster        emapplot_cluster
fortify.compareClusterResult
                        fortify
get_igraph              Get an iGraph object
get_w                   A function for get sel_w and net_w
ggtable                 ggtable
goplot                  goplot
gsInfo                  gsInfo
gseadist                gseadist
gseaplot                gseaplot
gseaplot2               gseaplot2
gsearank                gsearank
has_pairsim             Check whether the similarity matrix exists
heatplot                heatplot
list2graph              convert gene IDs to igraph object
pairwise_termsim        pairwise_termsim
plotting.clusterProfile
                        plotting-clusterProfile
pmcplot                 pmcplot
ridgeplot               ridgeplot
upsetplot               upsetplot method
wordcloud_i             Get cluster labels
