\name{dittoSeqNews}
\title{dittoSeq News}
\encoding{UTF-8}

\section{Version 1.2.6}{\itemize{
\item Build-side Bug Fix, minor: Added `rmarkdown` to the list of `Suggests:` packages.
}}

\section{Version 1.2.5}{\itemize{
\item Bug Fix, minor: Remove link to Seurat's `pbmc_small` object which moved to their SeuratObject package.
}}

\section{Version 1.2.4}{\itemize{
\item Bug Fix: numeric vectors given to `dittoHeatmap()` `order.by` input are now used directly to set order of heatmap columns, as originally intended.
\item Feature Update: `dittoHeatmap()`'s `order.by` can also now, alternatively, accept multiple gene/metadata names, rather than just one.
}}

\section{Version 1.2.3}{\itemize{
\item Added citation for the Advance Access version of the dittoSeq Applications Note published with Bioinformatics.
}}

\section{Version 1.2.2}{\itemize{
\item Bug Fix: keep `split.by` factor level ordering when used with `do.label`
}}

\section{Version 1.2.1}{\itemize{
\item Bug Fix: Better y-axis expansion for `dittoPlots()` with many ridgeplots
}}

\section{Version 1.2}{\itemize{
\item Added 3 New Visualization Functions, `dittoDotPlot()`, `dittoDimHex()` & `dittoScatterHex()`.
\item Expanded SummarizedExperiment compatibility across the entire toolset.
\item Added ComplexHeatmap integration to `dittoHeatmap()`, controlled by a new input, `complex`.
\item Added Rasterization for improved image editor compatibility of complex plots. (See the dedicated section in the vignette for details.)
\item Added `labels.split.by` input & `do.contour`, `contour.color`, and `contour.linetype` inputs to scatter/dim-plots.
\item Added `order` input to scatter/dim-plots for control of plotting order.
\item Added `metas` input for displaying such data with `dittoHeatmap()`.
\item Added `adjustment` input to `meta()`, which works exactly as in `gene()` (but this is not yet implemented within data grab of visualiation functions).
\item Added `adj.fxn` input to `meta()` aand `gene()` for added control of how data might be adjusted (but this is not yet implemented within data grab of visualiation functions).
\item Replaced (deprecated) `highlight.genes` input with `highlight.features` in `dittoHeatmap()`.
\item Replaced (deprecated) `OUT.List` input with `list.out` for all `multi_*` plotters.
}}

\section{Version 1.0.0}{\itemize{
\item Submitted to Bioconductor.
}}
