top_rows_overlap-ConsensusPartitionList-method {cola} | R Documentation

## Overlap of top rows from different top-value methods

### Description

Overlap of top rows from different top-value methods

### Usage

    ## S4 method for signature 'ConsensusPartitionList'
    top_rows_overlap(object, top_n = min(object@list[[1]]@top_n),
        method = c("euler", "upset", "venn", "correspondance"), fill = NULL, ...)

### Arguments

`object` | A `ConsensusPartitionList-class` object.
`top_n` | Number of top rows.
`method` | `euler`: plot Euler diagram by `euler`; `upset`: draw the Upset plot by `UpSet`; `venn`: plot Venn diagram by `venn`; `correspondance`: use `correspond_between_rankings`.
`fill` | Filled color for the Euler diagram. The value should be a color vector. Transparency of 0.5 are added internally.
`...` | Additional arguments passed to `plot.euler`, `UpSet` or `correspond_between_rankings`.

### Value

No value is returned.

### Author(s)

Zuguang Gu <z.gu@dkfz.de>

### See Also

`top_elements_overlap`

### Examples

    data(golub_cola)
    top_rows_overlap(golub_cola, method = "euler")
    top_rows_overlap(golub_cola, method = "upset")
    top_rows_overlap(golub_cola, method = "venn")
    top_rows_overlap(golub_cola, method = "correspondance")

[Package cola version 1.6.0 Index]