get_classes-ConsensusPartition-method {cola} | R Documentation

## Get subgroup labels

### Description

Get subgroup labels

### Usage

    ## S4 method for signature 'ConsensusPartition'
    get_classes(object, k = object@k)

### Arguments

`object` | A `ConsensusPartition-class` object.
`k` | Number of subgroups.

### Value

A data frame with subgroup labels and other columns which are entropy of the percent membership matrix and the silhouette scores which measure the stability of a sample to stay in its group.

If `k` is not specified, it returns a data frame with subgroup labels from all k.

### Author(s)

Zuguang Gu <z.gu@dkfz.de>

### Examples

    data(golub_cola)
    obj = golub_cola["ATC", "skmeans"]
    get_classes(obj, k = 2)
    get_classes(obj)

[Package cola version 1.6.0 Index]