suggest_best_k-HierarchicalPartition-method {cola} | R Documentation

## Guess the best number of partitions

### Description

Guess the best number of partitions

### Usage

    ## S4 method for signature 'HierarchicalPartition'
    suggest_best_k(object, jaccard_index_cutoff = 0.95)

### Arguments

`object` | A `HierarchicalPartition-class` object.
`jaccard_index_cutoff` | The cutoff for Jaccard index for comparing to previous k.

### Details

It basically gives the best k at each node.

### Value

A data frame with the best k and other statistics for each node.

### Author(s)

Zuguang Gu <z.gu@dkfz.de>

### Examples

    data(golub_cola_rh)
    suggest_best_k(golub_cola_rh)

[Package cola version 1.6.0 Index]