importCircExplorer2 {circRNAprofiler} | R Documentation

## Import circRNAs detected by CircExplorer2

### Description

The function importCircExplorer2 is specifically designed to read and adapt the circExplorer2 v2.3.4 output file (circularRNA_full.txt). See https://github.com/YangLab/CIRCexplorer2.git for more details.

### Usage

    importCircExplorer2(pathToFile)

### Arguments

`pathToFile` | A character string specifying the path to the file containing the detected circRNAs.

### Value

A data frame.

### Examples

    # Path to an example file containing circRNAs detected by CIRCexplorer2
    pathToFile <- system.file("extdata", "circexplorer2/circRNAs_001.txt",
    package="circRNAprofiler")

    # Inner function.
    # Import circRNAs.
    importCircExplorer2(pathToFile)

[Package circRNAprofiler version 1.4.2 Index]