huge_example {ceRNAnetsim} | R Documentation

## huge example

### Description

A sample dataset which is utilised through integration of TCGA_E9_A1N5_normal, TCGA_E9_A1N5_mirnanormal and high-throughput experimental miRNA:gene dataset.

### Format

A data frame with 7 variables and 26176 observation:

competing

  name of gene

miRNA

  name of miRNA

competing_counts

  Expression values of competing element (gene)

mirnaexpression_normal

  Expression value of miRNA elements in normal tissue

Energy

  Energy of miRNA:target binding

region_effect

  Coefficient for efficiency of location on target

seed_type_effect

  Coefficient for efficiency of seed sequence of miRNA:target interaction

### Source

Dataset was integrated by us.

[Package ceRNAnetsim version 1.2.1 Index]