soybean_ir_metrics {bigPint} | R Documentation

## Raw soybean leaves iron-metabolism metrics

### Description

This data contains metrics for raw RNA-sequencing read counts from a soybean dataset that compared leaves that were exposed to iron-rich (iron-postive) soil conditions versus leaves that were exposed to iron -poor (iron-negative) soil conditions. The data was collected 120 minutes after iron conditions were initiated. The metrics include the log fold change and the p-values for all genes and all pairwise combinations of treatment groups.

### Format

a `RData` instance, 1 list per treatment group combination and 1 row per gene

A nested list of length 1. The list contains the metrics for the 56,044 genes for the one treatment group combination.

### Details

Raw soybean leaves metrics

- ID gene name

- logFC log fold change

- PValue p-value

### See Also

`soybean_ir` for information about the treatment groups

[Package bigPint version 1.6.0 Index]