79bc43b40079a7031135e323bc60d2c5 *DESCRIPTION
ec16152509c981690ef24b8f1489e42c *INDEX
3e82cddf61226fafeaf6381816bd47c1 *Meta/Rd.rds
4d926158c46ed33927e92d5804c2df9c *Meta/data.rds
1d15b8cd6573641f81c4126b0438e9c2 *Meta/features.rds
d454ad08a9198d84168428c095c118f4 *Meta/hsearch.rds
6a49162927cb193b2704dd4a5e016285 *Meta/links.rds
5cd0dbe23c621e993e15407a89daf064 *Meta/nsInfo.rds
c182dd191d89af057e0df079ccc6d409 *Meta/package.rds
cb8ee2dcab817c5dfb546ab090c3ab8a *Meta/vignette.rds
aae06e60e6dc746d889b887cda628302 *NAMESPACE
c65cf0fd2768309df49e1428d7af9db3 *NEWS
d6c68f1fe41ced6e98a766a3757313da *R/ballgown
01f5910990b95aa49960175149fed47e *R/ballgown.rdb
656081270a1881fbc3d29f56b37982c0 *R/ballgown.rdx
fdc4adf6ef6200a347ad51956acada04 *data/bg.rda
50364de0e42ed550ab758567a503d0a3 *doc/ballgown.R
6cafd3ebcc75dc8a0920b0d210019de6 *doc/ballgown.Rmd
01e97bf1ee88b74ec122fc007b6d51af *doc/ballgown.html
0cc639deed6f66de811df00c2cf7702f *doc/index.html
622fa378b59bd017d31803657a09cce4 *extdata/annot.gtf.gz
10fd676ba636429f9515f623ebb1129c *extdata/hg19_genes_small.gtf.gz
9712175d9216638edd5563dc00560e49 *extdata/sample01/e2t.ctab
b0030b9e0d835f28e036b639726cdef7 *extdata/sample01/e_data.ctab
63afcb680be0aaecc7fff6c355832226 *extdata/sample01/i2t.ctab
fa4e74090f17f6f811579ced8e52d647 *extdata/sample01/i_data.ctab
7310dd98e10ceed48e2d5367230105fa *extdata/sample01/t_data.ctab
9712175d9216638edd5563dc00560e49 *extdata/sample02/e2t.ctab
fa659af6c76684c252595fc9f2ad2ec2 *extdata/sample02/e_data.ctab
63afcb680be0aaecc7fff6c355832226 *extdata/sample02/i2t.ctab
18f4d45408b0410e5b0bf99d79f3c572 *extdata/sample02/i_data.ctab
10dd7d5ec48e102ac1475fb3cb135d33 *extdata/sample02/t_data.ctab
9712175d9216638edd5563dc00560e49 *extdata/sample03/e2t.ctab
e565208a69f2ecd85a1aaf2056bebdc7 *extdata/sample03/e_data.ctab
63afcb680be0aaecc7fff6c355832226 *extdata/sample03/i2t.ctab
4e0e81a15ba6f8a425aef925fccaf4f3 *extdata/sample03/i_data.ctab
4ee176b65afbab163f0e397afb6b9a70 *extdata/sample03/t_data.ctab
9712175d9216638edd5563dc00560e49 *extdata/sample04/e2t.ctab
b5ac5a97c30d2ad2bfb93efed28a454c *extdata/sample04/e_data.ctab
63afcb680be0aaecc7fff6c355832226 *extdata/sample04/i2t.ctab
54365133f4f043d68c1482c312f160b8 *extdata/sample04/i_data.ctab
60d7e157baed349f229eddbe0499310b *extdata/sample04/t_data.ctab
9712175d9216638edd5563dc00560e49 *extdata/sample05/e2t.ctab
5c89d35348435d41401536a9d025880d *extdata/sample05/e_data.ctab
63afcb680be0aaecc7fff6c355832226 *extdata/sample05/i2t.ctab
a37a2fa552db03f6db728b484e708c13 *extdata/sample05/i_data.ctab
a4cfb5ffe4d907a6faad6935c5c51335 *extdata/sample05/t_data.ctab
9712175d9216638edd5563dc00560e49 *extdata/sample06/e2t.ctab
bd86699c8ebbb25d811ff168aa9589cf *extdata/sample06/e_data.ctab
63afcb680be0aaecc7fff6c355832226 *extdata/sample06/i2t.ctab
b916772be983d7f1936933b1325aaff7 *extdata/sample06/i_data.ctab
c5112b9da2a11eb47c22ce869c5c577b *extdata/sample06/t_data.ctab
9712175d9216638edd5563dc00560e49 *extdata/sample07/e2t.ctab
58d8458a2de9c9310e978eefa83e5d26 *extdata/sample07/e_data.ctab
63afcb680be0aaecc7fff6c355832226 *extdata/sample07/i2t.ctab
4cadb06d0ad4e97f4afd6e3ba38a6b8c *extdata/sample07/i_data.ctab
d06dcf2dc5ace75162fcf572ebf38237 *extdata/sample07/t_data.ctab
9712175d9216638edd5563dc00560e49 *extdata/sample08/e2t.ctab
3707f6490f9c582654d9f682dc089586 *extdata/sample08/e_data.ctab
63afcb680be0aaecc7fff6c355832226 *extdata/sample08/i2t.ctab
67db59fe3081385a80cf46c0ae30b1e4 *extdata/sample08/i_data.ctab
e9f68ce65b6b51bbdfa329bbcd593713 *extdata/sample08/t_data.ctab
9712175d9216638edd5563dc00560e49 *extdata/sample09/e2t.ctab
13ddfe57d05065355105307cfbad8deb *extdata/sample09/e_data.ctab
63afcb680be0aaecc7fff6c355832226 *extdata/sample09/i2t.ctab
9a6f17b8c69d806f2dc1bcc4d0a7e48e *extdata/sample09/i_data.ctab
d5a1d478ca26faef1eea955d85d88030 *extdata/sample09/t_data.ctab
9712175d9216638edd5563dc00560e49 *extdata/sample10/e2t.ctab
f9f67a721bc55790662e237e483c7411 *extdata/sample10/e_data.ctab
63afcb680be0aaecc7fff6c355832226 *extdata/sample10/i2t.ctab
e261de726c53d0e9b5257c324c5f54d6 *extdata/sample10/i_data.ctab
cbf8240e1691fdbfc34ceba545a277bf *extdata/sample10/t_data.ctab
9712175d9216638edd5563dc00560e49 *extdata/sample11/e2t.ctab
71c0002b297b3e475fde5458027df7b4 *extdata/sample11/e_data.ctab
63afcb680be0aaecc7fff6c355832226 *extdata/sample11/i2t.ctab
a8dabb84c1dc76efebf50c830c7f4c9d *extdata/sample11/i_data.ctab
a9ebafba6774907b0964eefa91668bf7 *extdata/sample11/t_data.ctab
9712175d9216638edd5563dc00560e49 *extdata/sample12/e2t.ctab
d5f54ef0b74fc0edec98a82dc83735b6 *extdata/sample12/e_data.ctab
63afcb680be0aaecc7fff6c355832226 *extdata/sample12/i2t.ctab
04050031a1f304245c476804ddb54fe9 *extdata/sample12/i_data.ctab
111c8e9db58e26bd3848eddb082c39d3 *extdata/sample12/t_data.ctab
9712175d9216638edd5563dc00560e49 *extdata/sample13/e2t.ctab
027c904f9a659d93a482f8b61715e4f7 *extdata/sample13/e_data.ctab
63afcb680be0aaecc7fff6c355832226 *extdata/sample13/i2t.ctab
1289d33f9adbfc0b22ee844b78705187 *extdata/sample13/i_data.ctab
5f29fbd76326281ecef7299529e2e2c7 *extdata/sample13/t_data.ctab
9712175d9216638edd5563dc00560e49 *extdata/sample14/e2t.ctab
f5924b89410634ef6a0a339e3538833a *extdata/sample14/e_data.ctab
63afcb680be0aaecc7fff6c355832226 *extdata/sample14/i2t.ctab
dfd8beda181392651e3008090de94797 *extdata/sample14/i_data.ctab
e8a1177afd72f2b53d59866627c21285 *extdata/sample14/t_data.ctab
9712175d9216638edd5563dc00560e49 *extdata/sample15/e2t.ctab
61e69e7a7f079ff09849108519359eb6 *extdata/sample15/e_data.ctab
63afcb680be0aaecc7fff6c355832226 *extdata/sample15/i2t.ctab
6b197ecc03c3dda35730b0b7c70eef7d *extdata/sample15/i_data.ctab
9150bb647c090bb55de60e34fb2cc8f7 *extdata/sample15/t_data.ctab
9712175d9216638edd5563dc00560e49 *extdata/sample16/e2t.ctab
79410e23d94f03fa07ac00e137852253 *extdata/sample16/e_data.ctab
63afcb680be0aaecc7fff6c355832226 *extdata/sample16/i2t.ctab
eadaaee7bc4778cba79cd67f34a58719 *extdata/sample16/i_data.ctab
a18774c9229fd8119b9d74a7efc543f9 *extdata/sample16/t_data.ctab
9712175d9216638edd5563dc00560e49 *extdata/sample17/e2t.ctab
92a858a135d9dac9eb54718410a1e982 *extdata/sample17/e_data.ctab
63afcb680be0aaecc7fff6c355832226 *extdata/sample17/i2t.ctab
4862d8ad80d8b5c484f88f3df913461e *extdata/sample17/i_data.ctab
c98ff348558c251853ededb08b5a6185 *extdata/sample17/t_data.ctab
9712175d9216638edd5563dc00560e49 *extdata/sample18/e2t.ctab
2cf81d2dcb51711c8966da684399dda0 *extdata/sample18/e_data.ctab
63afcb680be0aaecc7fff6c355832226 *extdata/sample18/i2t.ctab
d9078340ce6d07253dee3997934e3ffe *extdata/sample18/i_data.ctab
e55364bb807ddaa218a31685250a9fc8 *extdata/sample18/t_data.ctab
9712175d9216638edd5563dc00560e49 *extdata/sample19/e2t.ctab
aba97b698279a2a6cbc4fa1ec26692ee *extdata/sample19/e_data.ctab
63afcb680be0aaecc7fff6c355832226 *extdata/sample19/i2t.ctab
578f2fd5be5c7ace44c725f9ccb6f0d0 *extdata/sample19/i_data.ctab
c5a208ca236b3dea8a513f316c7485ce *extdata/sample19/t_data.ctab
9712175d9216638edd5563dc00560e49 *extdata/sample20/e2t.ctab
6e2e4beeef77538b8b28148ad262cd88 *extdata/sample20/e_data.ctab
63afcb680be0aaecc7fff6c355832226 *extdata/sample20/i2t.ctab
64271ce0582afe692d9ea149c577efdb *extdata/sample20/i_data.ctab
eb41b9487bea5ed79725a869892e2eb5 *extdata/sample20/t_data.ctab
a48796f1738e4ab5f643993ddebdb3e9 *extdata/tiny.genes.results.gz
c2be2c44533cf6ab58cc1e6dd82c99f8 *extdata/tiny.isoforms.results.gz
5c6c82cd51f78e83547d6ef0bea5f9f3 *extdata/tiny2.genes.results.gz
cdf008df213762f620bc5d551b918060 *extdata/tiny2.isoforms.results.gz
191712a21ff66e2387278203795a5486 *help/AnIndex
31f6afbe60e2539407a73e84f7e7664c *help/aliases.rds
4e67ad8a418646af4c45662d0a87c673 *help/ballgown.rdb
d78eb1c5d77d0f184afa25b45348641a *help/ballgown.rdx
31a9b0741815de8e4c51c99a8abe1edc *help/paths.rds
0a03d211fecba99d36c712dc2761ea2d *html/00Index.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
b1ff4e76b416b4309304ec21716eef43 *html/annotate_assembly.html
afd70580e4e4ed36f63d9e394d935961 *html/ballgown-class.html
c0daae3fb6f736834a55a7edec101029 *html/ballgown-constructor.html
742fc335bb5e606895156b4b4fe74e88 *html/ballgown-package.html
4e743f0e7fa64d99f47e7e008776ef03 *html/ballgownrsem.html
c0e2c12cd7e59318fa30ae3506165642 *html/bg.html
7a37821e72915f3f5b3ee567f8d3f085 *html/checkAssembledTx.html
287708bd28c230d9db89ceb79381c411 *html/clusterTranscripts.html
d61e1a9b59b2ac6bfab9ffde1da1da68 *html/collapseTranscripts.html
a637ca2b837d5cc0959db3565965a9c3 *html/contains.html
d2a4148cf6f7bd33ef3a76b54efda9ab *html/dirs.html
9d0bff31910c2ea06a5cc9186173b1b9 *html/eexpr.html
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4d8407940064257fe30b3aa21cdfc24f *html/geneNames.html
3b579c275a2d5228f0c661bc06d91d69 *html/getAttributeField.html
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3243a6bc0b6245f4ba8c00e5a53923c4 *html/gexpr.html
ca8ebb8e435e24c556397094d13021b8 *html/gffRead.html
1f08eafd87f752f2dbd3c6e550eba36d *html/gffReadGR.html
9e7442dca3614cf8a6a23be55096a27a *html/iexpr.html
99b36ceddb6e917c5d192797734aa062 *html/indexes-replace.html
fec90698dafd5178786a693576880497 *html/indexes.html
7c88ae8fbbf65e810e7226df732fa622 *html/last.html
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cbda12322cfc74cca53423a4d85f5490 *html/pData-replace.html
7ed37d3c4526311fb541b53a9c3f15ca *html/pData.html
920c4d87574d7a5ed4687cb66064b594 *html/pctOverlap.html
a1204eedb39b227899f697bbc1c800f4 *html/plotLatentTranscripts.html
af2e6e01e592061a856f766b03130044 *html/plotMeans.html
08a5ce8113b0e90353532295fd6805d3 *html/plotTranscripts.html
a3f441702d7ecefba7f6f2641e482918 *html/sampleNames.html
2ea6093cae82838702756345ca06c6a6 *html/seqnames.html
4b658f806d513e77b2694cc84614f0cc *html/stattest.html
69f61eaf7662f56f9224db753f828090 *html/structure.html
a5cc4484d1731ee8cf5d947bdcad2be7 *html/subset.html
316fca015a1dc4e7e4ba4db370fe8e3c *html/tGene.html
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0d0486cc8149934a10cad5b841c683d1 *html/transcriptIDs.html
bd1476003da60ce43c753fd72bc1c1b9 *html/transcriptNames.html
aa62992d5979e68cddeba287eeb23fe7 *html/writeFiles.html
