SynExpressionSet-class {attract} | R Documentation

## Class SynExpressionSet

### Description

This is a class representation for storing synexpression group information.

### Objects from the Class

Objects are output by the function `findSynexprs`. Objects can also be created by using `new("SynExpressionSet", ...)`.

### Slots

`groups`:

  A `list` object denoting the probes or gene IDs (rnaseq) belonging to each synexpression group.

`profiles`:

  A `matrix` of average expresson profiles for each synexpression group, each profile is stored as a row.

### Methods

No methods have yet been defined with class "SynExpressionSet" in the signature.

### Note

This class is described in more detail in the vignette.

### Author(s)

Jessica Mar jess@jimmy.harvard.edu

### Examples

    new.synexpressionset <- new("SynExpressionSet", groups=list(), profiles=matrix(0))

[Package attract version 1.42.0 Index]