artmsPhotonOutput {artMS} | R Documentation

## Generate PHOTON Input file

### Description

It takes as input the `imputedL2fcExtended.txt` results generated by the `artmsAnalysisQuantifications()` function and generates the PHOTON input file. Please, notice that the only species suported by PHOTON is humans.

### Usage

    artmsPhotonOutput(inputFile, output_dir = ".", verbose = TRUE)

### Arguments

`inputFile` | (char) the `imputedL2fcExtended.txt` file name and location
`output_dir` | (char) Name of the folder to output results (Default: current. Recommended: "photon_input_files" or similar)
`verbose` | (logical) `TRUE` (default) to show function messages

### Value

Multiple output files (inputs of phosfate)

### Examples

    ## Not run:
    artmsPhotonOutput(inputFile)

    ## End(Not run)

[Package artMS version 1.8.3 Index]