diversity_beta_boxplot {animalcules} | R Documentation

## Beta diversity boxplot

### Description

Beta diversity boxplot

### Usage

    diversity_beta_boxplot(
      MAE,
      tax_level,
      input_beta_method,
      input_select_beta_condition
    )

### Arguments

`MAE` | A multi-assay experiment object
`tax_level` | The taxon level used for organisms
`input_beta_method` | bray, jaccard
`input_select_beta_condition` | Which condition to group samples

### Value

A plotly object

### Examples

    data_dir = system.file('extdata/MAE.rds', package = 'animalcules')
    toy_data <- readRDS(data_dir)
    p <- diversity_beta_boxplot(toy_data,
                                tax_level = 'genus',
                                input_beta_method = 'bray',
                                input_select_beta_condition = 'DISEASE')
    p

[Package animalcules version 1.6.0 Index]