GenomeOfNl_raw {YAPSA} | R Documentation

## Example data for the Indel vignette

### Description

`GenomeOfNl_raw`: A data frame contains the gemiline varinats of the dutch population. carrying point mutation calls. It represents a subset of the data stored in ftp://ftp.sanger.ac.uk/pub/cancer/AlexandrovEtAl/somatic_mutation_data/Lymphoma B-cell/Lymphoma B-cell_clean_somatic_mutations_for_signature_analysis.txt. In the file available under that link somatic point mutation calls from several samples are listed in a vcf-like format. One column encodes the sample the variant was found in.

### Usage

    data(GenomeOfNl_raw)

### Value

A data frame in a vcf-like format

### References

release version 5 http://www.nlgenome.nl/?page_id=9

### Examples

    data(GenomeOfNl_raw)
    head(GenomeOfNl_raw)
    dim(GenomeOfNl_raw)

[Package YAPSA version 1.16.0 Index]