classify_indels {YAPSA} | R Documentation

## INDEL function V1 - not compartible with AlexandrovSignatures

### Description

INDEL function V1 - not compartible with AlexandrovSignatures

### Usage

    classify_indels(
      in_df,
      in_ALT.field = "ALT",
      in_REF.field = "REF",
      in_breaks = c(-Inf, -10, -3, 0, 2, 9, Inf),
      in_labels = c("del3", "del2", "del1", "in1", "in2", "in3")
    )

### Arguments

`in_df` | Input data frame containing the variances in a vcf-like format
`in_ALT.field` | Column number for alternitve field
`in_REF.field` | Coloumn number for reference field
`in_breaks` | Handed over to function cut
`in_labels` | Handed over to function cut

### Value

classVector, a factor vector of indel sizes

### Examples

     NULL

[Package YAPSA version 1.16.0 Index]