Uniprot2GO {ViSEAGO} | R Documentation

## Check available organisms databases at Uniprot.

### Description

Check the Uniprot-GOA available organisms.

### Usage

    Uniprot2GO()

### Details

This function downloads the current_release_numbers file (ftp://ftp.ebi.ac.uk/pub/databases/GO/goa/current_release_numbers.txt) from Uniprot-GOA which contains available organisms.

### Value

a `genomic_ressource-class` object required by `annotate`.

### References

Matt Dowle and Arun Srinivasan (2017). data.table: Extension of 'data.frame'. R package version 1.10.4. https://CRAN.R-project.org/package=data.table.

Huntley, RP, Sawford, T, Mutowo-Meullenet, P, Shypitsyna, A, Bonilla, C, Martin, MJ, O'Donovan, C (2015). The GOA database: gene Ontology annotation updates for 2015. Nucleic Acids Res., 43, Database issue:D1057-63.

### See Also

Other genomic_ressource: `Bioconductor2GO()`, `Custom2GO()`, `Ensembl2GO()`, `EntrezGene2GO()`, `annotate()`, `available_organisms()`, `genomic_ressource-class`, `taxonomy()`

### Examples

    ## Not run:
    # List Uniprot-GOA available organisms
    Uniprot<-ViSEAGO::Uniprot2GO()

    ## End(Not run)

[Package ViSEAGO version 1.4.0 Index]