97699eef41ce946dfa635d56abdd413a *CITATION
36de714633fbf7386a40794125bec6a9 *DESCRIPTION
3ce97126dbb3ddb3f2d76e1f64df7d49 *INDEX
e4b0d2dacb68df7f3a648e278e2f1005 *Meta/Rd.rds
48dbfc358075d1508b7c33fc5dc8ad86 *Meta/data.rds
1d15b8cd6573641f81c4126b0438e9c2 *Meta/features.rds
9c4f5d151ac04cb35d1717972ff3adcf *Meta/hsearch.rds
c1a7934c0d01b02a4d708fd3484f7ea9 *Meta/links.rds
5e407b3d34f29ada5e31887c2bc09f57 *Meta/nsInfo.rds
1ef2de66c9a09c92bfcb13ecf20842c0 *Meta/package.rds
ded8364bc8fae7ee7046a8c6f39f0c9b *Meta/vignette.rds
dec625e4cf9cb1edbe605761f22dce6e *NAMESPACE
64ad2e8dcb0dd66dca17b938fa4bbd75 *NEWS
d6c68f1fe41ced6e98a766a3757313da *R/TFBSTools
123de5856819df3ee4cf6413b9f9b95a *R/TFBSTools.rdb
300ee44ee748d93c348a8354511510cd *R/TFBSTools.rdx
351cc7b084a4ba1cd01449f5bad5f864 *TFBSToolsBuild/build.r
fb342bcf3426bc27d883c9d8bdd38939 *TFBSToolsBuild/build2.R
3dd4a35e1a3d3556ee32b13147a3d79c *TFBSToolsBuild/timing.R
5b0bbb468151c468bfa69b3af9701ae4 *data/Rdata.rdb
efd78b1cc520f25f8a0fac86a215da3b *data/Rdata.rds
8ed23e69012bd61a714f139ae2de4122 *data/Rdata.rdx
c34a4ed4006408a87a49c6122b2c3def *doc/TFBSTools.R
b03d2adeacb192328a8d0cd17a3653f5 *doc/TFBSTools.Rmd
6f04aa2ecbc321d691bdb94727b6fdfc *doc/TFBSTools.html
fe68be58ec878683584c27ca57e669d7 *doc/index.html
ddae4a3671aa7c8f585dddeb6442b5ca *extdata/MA0001.1.pfm
ecf5fb280abd62ce8951ce9a07834a76 *extdata/crp0.s
4ec79a4902d3d315ddf7bb1ccc39b8ac *extdata/hg19.danRer7.net.axt
e0958dde6677347b5de25090f9d39b0e *extdata/meme.output
d8d894fa0debb678314c88d2c3c7258a *extdata/pfm_all_example.txt
e79a8420f1e308fb18e0c9feb39f7fa6 *extdata/tffm_detailed.xml
1cd3574f51db5ea1835a8d43768f0b68 *extdata/tffm_first_order.xml
ab3ae7060138b08d22172e7044767daa *help/AnIndex
c493aa717e84a039811c2495c3e3ff1a *help/TFBSTools.rdb
210e623f0762c261fe5937b4d7627671 *help/TFBSTools.rdx
83b578770262422945c63d2ddac37dba *help/aliases.rds
a699c5dcb4e9606511267673751d2ffa *help/paths.rds
7649b4c422e7b1abcb94c4382852e4a9 *html/00Index.html
d0335d73c01f888b3bf427be1680b63b *html/IUPAC2Matrix.html
b8712919e26fdf94a1329176236ed6ce *html/MA0004.1.html
5b9c127d2e8a8dcef143449516debd57 *html/MotifSet-class.html
ed5b108c9418cbee9a37491e37b7bfd3 *html/PFMSimilarity-methods.html
643bef97e49809cca5b3bfaafa51cbc4 *html/PWMSimilarity-methods.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
54b19c2c59472b0e90b4e2de7978b80b *html/SitePairSet-class.html
d4c3a6203713d76498c78f0e9027b893 *html/SitePairSetList-class.html
41f5a28b9736434c6090d4d0c66af0dc *html/SiteSet-class.html
e1cb02d1279ab905a2c4913bf71aea85 *html/SiteSetList-class.html
514dfec2598ae685b4778d2148dc3018 *html/TFBSTools-package.html
069948ba121b477736402b8bd3aabfdc *html/TFFM-class.html
ffd524c84cf05591b2947eec38798bb5 *html/XMatrix-class.html
ef54b27467bec2d005f64a3cfd1eb346 *html/XMatrixList-class.html
5c8a510a827bc9d35b0916a1c51bdf67 *html/calConservation-methods.html
3580d88507a75b3abae1f66ad113c526 *html/deleteMatrixHavingID-methods.html
402291a80b2eb2f128b02a9c1cc03cf2 *html/dmmEM-methods.html
fd6ce6def6c2b8c2ad735e89bc3df9d3 *html/getEmissionProb.html
398d618f736d475f5dedba8d55a17fd5 *html/getMatrixByID-methods.html
845e4982ec3719c27c5c9656ff63fe3c *html/getMatrixSet-methods.html
4d8fe6c335050128f4e6b01eaabb4c84 *html/getPosProb.html
28209acfbf4a7e06e41b16e4a834b103 *html/makeFlatFileDir.html
29fa1d0a5dd882733bd2a0175650839f *html/parseMEMEOutput.html
f06060c9267c179b51fd351164deb554 *html/permuteMatrix-methods.html
c31d9b78962acef1d325528eb786a474 *html/rPWMDmm-methods.html
f7661fdca218d6a27495322405053c67 *html/readJASPARMatrix.html
26811fc1efc41f357121c04e0d0f137e *html/readXMLTFFM.html
745d5cdb0d4e193a07cf48380fab1b8c *html/runMEME-methods.html
41644fa6a1085aea6ffffd91f1144bc4 *html/sampleRanges.html
8a22dd77125f8206cc0a4858d9999848 *html/searchAln-methods.html
36824b3aed1f7304ec66d349e67487e1 *html/searchPairBSgenome-methods.html
821fb0d93dd8224ed337e99490862d79 *html/searchSeq-methods.html
b662ee3ea3f224aa737e4f4e31ac634b *html/seqLogo.html
0bb2f8113d7d0d269d64dfa0cf2ee0dc *html/shannon.entropy.html
2ab595c2fbdbbc17172c0b76edf18bc5 *html/toGRangesList-methods.html
967d1103a2a1d09790ee3e6b07aae23d *html/toICM-methods.html
cf20c8a1097c947e16c792a558b596f0 *html/toPWM-methods.html
54dbad61267c8472af49ff157f08f521 *html/writeGFF3-methods.html
1258115b8c6ee24d1831c12fd05c6762 *libs/i386/TFBSTools.dll
bbac6eb2228a690949ab444790ab2bfb *libs/x64/TFBSTools.dll
942668b48084fa316e13885bb0c87ce0 *obsolete/PairwiseAlignmentTFBS-class.Rd
c3666fa74ce653ab0926e6fefba16e26 *obsolete/TFBSTools.Rnw
643b486141d031a41695a1e80e4f1c4d *obsolete/matrixAligner.c
