IUPAC2Matrix {TFBSTools} | R Documentation

## IUPAC2Matrix

### Description

Convert a IUPAC string into a Postion Weight Matirx

### Usage

      IUPAC2Matrix(x)

### Arguments

`x` | The IUPAC string.

### Details

The mapping between IUPAC Extended Genetic Alphabet and the DNA bases letters are from `IUPAC_CODE_MAP` in Biostrings package.

### Value

A matrix with position weight.

### Author(s)

Ge Tan

### Examples

      x <- "RMGNV"
      IUPAC2Matrix(x)

[Package TFBSTools version 1.28.0 Index]