deseq2_norm_rle {TBSignatureProfiler} | R Documentation

## Normalize gene expression count data.

### Description

Normalize gene expression count data.

### Usage

    deseq2_norm_rle(inputData)

### Arguments

`inputData` | a `data.frame` or `matrix` of gene expression count data. Required.

### Value

A `data.frame` or `matrix` of normalized count data.

### Examples

    ## Example using the counts assay from a SummarizedExperiment
    data_in <- SummarizedExperiment::assay(TB_indian, "counts")
    res <- deseq2_norm_rle(data_in)

[Package TBSignatureProfiler version 1.2.0 Index]