fn_gene_miRNA_F_test {SPONGE} | R Documentation

## Perform F test for gene-miRNA elastic net model

### Description

Perform F test for gene-miRNA elastic net model

### Usage

    fn_gene_miRNA_F_test(g_expr, m_expr, model, p.adj.threshold = NULL)

### Arguments

`g_expr` | A gene expression matrix with samples in rows and genes in columns
`m_expr` | A miRNA expression matrix with samples in rows and genes in columns. Sample number and order has to agree with above gene expression matrix
`model` | A nested elastic net model to be tested
`p.adj.threshold` | Threshold for FDR corrected p-value

### Value

return data frame with miRNA, fstat and adjusted p.value (BH).

[Package SPONGE version 1.12.0 Index]